DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14893 and FarO

DIOPT Version :10

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster


Alignment Length:526 Identity:147/526 - (27%)
Similarity:246/526 - (46%) Gaps:77/526 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IQGFYKDKVVFLTGATGFLGKVIIEKLLRTTEVKRIYAMMRPKRGKDIQERLAIWQKDPLFEVLL 80
            ::.|::|..:|:||.:|.:||.::|||||:..|:|||.::||::....::||...::..:|.||.
  Fly     9 MEEFFEDSEIFVTGGSGVVGKALVEKLLRSCNVRRIYVLLRPRKQLTAEQRLVRLRQATVFHVLA 73

  Fly    81 KAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHVALAINTRGTRL 145
            ..||:.|.:|..:.||...|.|||:.|..:.: ..|.:|.|.||||||:|||..|:.:|..||..
  Fly    74 VQKPEELDKIVAVPGDVSLPGLGIDPSMMQRM-KGVSLVYHCAATVRFDEPLREAVRLNVGGTLE 137

  Fly   146 MLQLAKEMLQLEAYLHISTAFSNCVIFRIEEKFYPEHLTCDANSVLAM-SELLSEQMMDKLAPTL 209
            .|:.|:.:.||.|::|:||.:||..:.|:|.|:|...:  |....|.| .::..:.|::.|...|
  Fly   138 ALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPM--DWRLCLRMIDDVADDGMLNALTRKL 200

  Fly   210 VGNFPNTYTYTKALAEDVVLREFGDLPLSIFRPSVIIATHEEPVSGWIDNLYGPIAHIYGVSHGV 274
            :..||||||:||.|||.:|......||:.::|||:::...|:|..|:..:|.|.:.....|..|:
  Fly   201 IMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALVGAGI 265

  Fly   275 LRLTTYDKDGYASLVPVDYCANAALASIWQTSKDKSQRNAISQPAIYTL---------APSEKNL 330
            |:.....||....:.|.|.                    .|.....||.         .|::..:
  Fly   266 LKTVYLGKDIRLDITPQDI--------------------GIKSMLCYTKMGYDIYRQGPPADLPV 310

  Fly   331 LLNTD--FIKHSLIH----------RNDFPLTKMIWYPFVHNISNPRIFPLAAFFYHTLPGYFYD 383
            .|::.  .:.|:...          ..|....|.:..|..|.......:....|....||....|
  Fly   311 FLSSSCTHVPHTFTQIAEQMDTLDLWRDVAFEKNLMIPGCHYTDKRWAYQFLVFTKQILPALILD 375

  Fly   384 LALRLSGRKPRLVKLYRSIHANIAVLEHFMNNSWHFETKSTDRLRVMMSPEDRRLYNFDMETLDW 448
            |.||:.|:||.|:...|..:..:.|::.||.|:|  ::.....:..:....:...:|||.     
  Fly   376 LLLRIFGQKPVLMSAVRKAYQTLEVMQPFMFNNW--DSPGVSDMETLSKHGEGSAFNFDA----- 433

  Fly   449 KEYFR-------------KALFGMRLYLTKEPPTQESLEQGRRLFYRLKILHYSFVTLLCVIAGF 500
               |.             ..|..:|.:|.:|.|  ::||:.:|:. |:|:..|..:.|      |
  Fly   434 ---FNHPDIHGLVIQSCSNMLHSIRTHLLREDP--KTLERSKRIL-RIKVFLYRLLRL------F 486

  Fly   501 LLWTLV 506
            ||:.|:
  Fly   487 LLYKLI 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 FAR-N_SDR_e 23..339 CDD:187547 103/327 (31%)
Sterile 374..465 CDD:460779 23/103 (22%)
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 104/332 (31%)
Sterile 379..>410 CDD:460779 11/32 (34%)

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