DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14893 and far1

DIOPT Version :9

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_005174372.1 Gene:far1 / 406829 ZFINID:ZDB-GENE-040426-2908 Length:518 Species:Danio rerio


Alignment Length:510 Identity:182/510 - (35%)
Similarity:274/510 - (53%) Gaps:42/510 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IQGFYKDKVVFLTGATGFLGKVIIEKLLRTTE-VKRIYAMMRPKRGKDIQERLAIWQKDPLFEVL 79
            |..:|..|.|.:||||||:|||::|||||:.. ||..|.::|||.|:....|:|......||:.|
Zfish     4 IPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMINCKLFDRL 68

  Fly    80 LKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHVALAINTRGTR 144
            .:.:||...:|..|..|...|:|.::..|::.|...:::|.|.|||:||||||..|:.:|...|:
Zfish    69 REDQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEPLKDAMQLNVLATQ 133

  Fly   145 LMLQLAKEMLQLEAYLHISTAFSNCVIFRIEEKFYPEHLTCDANSVLAMSELLSEQMMDKLAPTL 209
            .|:.||..|..||.::|:|||::||....|||..||..:  |...::...|.:.::::..:.|.|
Zfish   134 KMVSLAHRMKHLEVFIHVSTAYANCDRELIEEVVYPPPV--DYRKLIDTLEWMDDKLVSLMTPRL 196

  Fly   210 VGNFPNTYTYTKALAEDVVLREFGDLPLSIFRPSVIIATHEEPVSGWIDNLYGPIAHIYGVSHGV 274
            :|..||||||||||||.:|.:|.|:|.::|.|||::.|:.:||..|||||..||.........|:
Zfish   197 LGERPNTYTYTKALAEQLVQQECGNLNIAIIRPSIVGASWKEPFPGWIDNFNGPSGIFIAAGKGI 261

  Fly   275 LRLTTYDKDGYASLVPVDYCANAALASIWQTSKDKSQRNAISQPAIYTLAPSEKNLLL------- 332
            ||......:..|.|||||...|..||:.|.:.   |||:|  :|         ::||:       
Zfish   262 LRTMRASNNAVADLVPVDVVINTTLAAAWYSG---SQRHA--RP---------RSLLVYNCTTGG 312

  Fly   333 -------NTDFIKHSLIHRNDFPLTKMIWYPFVHNISNPRIFPLAAFFYHTLPGYFYDLALRLSG 390
                   ..::...|...||  ||.:....|.|:..:|..|........|..|.:.|||.||:||
Zfish   313 INPFHWGEVEYHVISTFKRN--PLEQAFRRPNVNLTTNHLINQYWIAVSHKAPAFLYDLFLRMSG 375

  Fly   391 RKPRLVKLYRSIHANIAVLEHFMNNSWHFETKSTDRLRVMMSPEDRRLYNFDMETLDWKEYFRKA 455
            |:||::|....:|..:.|||:|.::||.:.|.:...|...|..||::::|||:..|.|.||....
Zfish   376 REPRMMKTITRLHKAMMVLEYFTSHSWVWNTDNVTMLMNQMGAEDKKVFNFDVRQLHWAEYMENY 440

  Fly   456 LFGMRLYLTKEPPTQESLEQGRRLFYRLKILHYSFVTLLCVIAGFLLWTLVRLFI 510
            ..|.:.|:..|  ....|...|:...:|:.:.|:|.|:|.|    |:|   |:||
Zfish   441 CMGTKKYVLNE--ELSGLPAARKHLNKLRNIRYTFNTVLVV----LIW---RIFI 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 PLN02996 19..452 CDD:215538 164/447 (37%)
FAR-N_SDR_e 23..339 CDD:187547 123/330 (37%)
Sterile 375..465 CDD:281068 34/89 (38%)
far1XP_005174372.1 FAR-N_SDR_e 11..333 CDD:187547 126/339 (37%)
Sterile 360..450 CDD:308580 34/89 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593274
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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