DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14893 and CG8303

DIOPT Version :10

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_611141.3 Gene:CG8303 / 36858 FlyBaseID:FBgn0034143 Length:543 Species:Drosophila melanogaster


Alignment Length:539 Identity:153/539 - (28%)
Similarity:253/539 - (46%) Gaps:54/539 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NNIVSRTEMDNG--------IQGFYKDKVVFLTGATGFLGKVIIEKLLRT-TEVKRIYAMMRPKR 59
            |:|.:.....||        |..|:..|.:|:||.|||||.|:||.||.| .::..||.::|.||
  Fly    19 NSIGNGKHRVNGHQLSTSLTIPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKR 83

  Fly    60 GKDIQERLAIWQKDPLFEVLLKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAA 124
            ..|..||:....:.|:||   |.....|.::..:.|:..:|:.|......:.|:..|:::.|.||
  Fly    84 KFDPNERIRRLLQKPIFE---KYSEKTLSKVVPVVGELSEPNFGFGPELLQELIDRVNVIYHSAA 145

  Fly   125 TVRFNEPLHVALAINTRGTRLMLQLAKEMLQLEAYLHISTAFSNC-VIFRIEEKFYPEHLTCDAN 188
            |::|:.||..|:..|..||...::|||::.||.||::.||||.|. ....|.|:.|....  |..
  Fly   146 TIKFSSPLRTAIRTNLTGTMRTIELAKQLKQLAAYIYCSTAFCNSNNRGLIAEEVYKSQF--DPY 208

  Fly   189 SVLAMSELLS--EQMMDKLAPTLVGNFPNTYTYTKALAEDVVLREFGDLPLSIFRPSVIIATHEE 251
            .::.|:|..|  |...|:.....:.:.|||||:||.|:|::::.|...||.:|.|||::..|.|.
  Fly   209 EMMKMAEDDSAWEDFTDQKCKGYIRDHPNTYTFTKNLSENLLMAEMSGLPAAIVRPSIVYGTLEH 273

  Fly   252 PVSGWIDNL-YGPIAHIYGVSHGVLRLTTYDKDGYASLVPVDYCANAALASIWQTSKDKSQRNAI 315
            |:.||:.|. .|.:..:.|...|:.|....:.:....::|.||..|::|...|.....|     :
  Fly   274 PMKGWVGNANSGHLGFLAGFVKGIFRTMCGNANAVIDIIPCDYVINSSLVMGWYVGTRK-----L 333

  Fly   316 SQPAIYTLAPSEKNLLLNTDF--IKHSLIHRNDFPLTKMIWYPFVHNISNPRIFPLAAFFYHTLP 378
            .||.|......|.|.|...:|  |.:..:.|:  |....:|.| |..:.|...:.|..:.:|.||
  Fly   334 EQPEIIHCTSGEVNPLNLAEFCTIINDSVERH--PPNSFVWKP-VTKLRNGWRYNLFFYLFHLLP 395

  Fly   379 GYFYDLALRLSG---RKPRLVKLYRSIHANIAVLEHFMNNSWHFETKSTDRLRVMMSPEDRRLYN 440
            ...:.:..:|.|   .:....:..|.........::|::..:.:..|:..|:..::...|||.||
  Fly   396 AMVFIIPEKLFGIGMPQHTAYEYMRVFQKGTKAFDYFLDKDFRYSLKNALRISALIPESDRRRYN 460

  Fly   441 FDMETLDWKEYFRKALFGMRLYLTKEPPTQESLEQGRRLFYRLKILHYS---------------- 489
            ||....||.|:..:.|.|:|.:..||  :..:.:..|..:....:|:|:                
  Fly   461 FDASQCDWSEFIDRCLIGIRRFYFKE--SAVTTDWHRNYWKVFNVLYYAGYVVIFAVLYFALTLT 523

  Fly   490 -----FVTLLCVIAGFLLW 503
                 .:||..:|.|||:|
  Fly   524 LGLQIGLTLAVLIWGFLVW 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 FAR-N_SDR_e 23..339 CDD:187547 106/322 (33%)
Sterile 374..465 CDD:460779 22/93 (24%)
CG8303NP_611141.3 FAR-N_SDR_e 46..366 CDD:187547 107/331 (32%)
Sterile 391..485 CDD:460779 22/93 (24%)

Return to query results.
Submit another query.