DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14893 and far1

DIOPT Version :9

Sequence 1:NP_650568.2 Gene:CG14893 / 42023 FlyBaseID:FBgn0038451 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_017948360.1 Gene:far1 / 100038270 XenbaseID:XB-GENE-973776 Length:518 Species:Xenopus tropicalis


Alignment Length:510 Identity:177/510 - (34%)
Similarity:280/510 - (54%) Gaps:42/510 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IQGFYKDKVVFLTGATGFLGKVIIEKLLRT-TEVKRIYAMMRPKRGKDIQERLAIWQKDPLFEVL 79
            |..||:.|.|.:||||||:|||::|||||: ..||.:|.::|||..:..:||:|......||:.|
 Frog     4 IPEFYRGKNVLITGATGFMGKVLLEKLLRSCPNVKAVYVLVRPKASQKPRERVAEMMSCKLFDRL 68

  Fly    80 LKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHVALAINTRGTR 144
            ...:|:..:::..|:.:...|:|.:::.|:.:|:..:.||.|.||||||||.|..|:.:|...||
 Frog    69 RDEQPECAQKVIAISSELTQPELDLSKEDQDMLIDCIDIVFHCAATVRFNESLRDAMQLNVIATR 133

  Fly   145 LMLQLAKEMLQLEAYLHISTAFSNCVIFRIEEKFYPEHLTCDANSVLAMSELLSEQMMDKLAPTL 209
            .:|.||:::.:||.::|:|||::||...:|||..||..:  |...::...|.:.:.:::.:.|.|
 Frog   134 QLLYLAQKIKKLEVFIHVSTAYANCNRKQIEEMVYPPPV--DPKKLIESLEWMDDGLVNDITPKL 196

  Fly   210 VGNFPNTYTYTKALAEDVVLREFGDLPLSIFRPSVIIATHEEPVSGWIDNLYGPIAHIYGVSHGV 274
            :|:.||||||||||||.||.:|...|.::|.|||::.|:.:||..|||||..||.........|:
 Frog   197 IGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   275 LRLTTYDKDGYASLVPVDYCANAALASIWQTSKDKSQRNAISQPAIYTLAPSEKNLLL------- 332
            ||......:..|.|:|||...|..||:.|.     |..|..|:|         :|:|:       
 Frog   262 LRTMRASNNAVADLIPVDVVVNTTLAAAWY-----SGVNRYSRP---------RNILVYNCTTGG 312

  Fly   333 -------NTDFIKHSLIHRNDFPLTKMIWYPFVHNISNPRIFPLAAFFYHTLPGYFYDLALRLSG 390
                   ..::...|...||  ||.:....|.|:..||..::.......|..|.:.||:.||::|
 Frog   313 TNPFHWGEVEYHVISTFKRN--PLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDVYLRITG 375

  Fly   391 RKPRLVKLYRSIHANIAVLEHFMNNSWHFETKSTDRLRVMMSPEDRRLYNFDMETLDWKEYFRKA 455
            |.||::|....:|..:.:||:|.:|||.:..::|:.|...:||:|::.:|||:..|.|.||....
 Frog   376 RSPRMMKTITRLHKAMMLLEYFTSNSWVWNNENTNMLMSQLSPDDKKAFNFDVRQLHWAEYMENY 440

  Fly   456 LFGMRLYLTKEPPTQESLEQGRRLFYRLKILHYSFVTLLCVIAGFLLWTLVRLFI 510
            ..|.:.|:..|  ....|...|:...:|:.:.|.|.|:|.|    |:|   |:||
 Frog   441 CMGTKKYVLNE--EMSGLPAARKHLNKLRNIRYGFNTILVV----LIW---RVFI 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14893NP_650568.2 PLN02996 19..452 CDD:215538 159/447 (36%)
FAR-N_SDR_e 23..339 CDD:187547 119/330 (36%)
Sterile 375..465 CDD:281068 32/89 (36%)
far1XP_017948360.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8217
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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