DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17560 and LYS2

DIOPT Version :9

Sequence 1:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_009673.1 Gene:LYS2 / 852412 SGDID:S000000319 Length:1392 Species:Saccharomyces cerevisiae


Alignment Length:379 Identity:86/379 - (22%)
Similarity:144/379 - (37%) Gaps:73/379 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VFLTGGTGFLGKVIIEKLLRTTEVN---RIYSLIRPKRGVPIEDRITTWAKDPVFEVLLRTKPDA 75
            ||:||.|||||..|:..||..:..|   ::::.:|.|      |....:|:.....:...|..:.
Yeast   973 VFVTGVTGFLGSYILADLLGRSPKNYSFKVFAHVRAK------DEEAAFARLQKAGITYGTWNEK 1031

  Fly    76 L-QRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAINVRATRLMLQLA 139
            . ..:..:.||......|:|......|...|.|:||..|.|.:..........||.:|..::.||
Yeast  1032 FASNIKVVLGDLSKSQFGLSDEKWMDLANTVDIIIHNGALVHWVYPYAKLRDPNVISTINVMSLA 1096

  Fly   140 K-QMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGE---LVSNKLLDAMEPSLVG 200
            . ...:...||..::....            |:....|||:::.|:   |.|:.|:::.. .|.|
Yeast  1097 AVGKPKFFDFVSSTSTLDT------------EYYFNLSDKLVSEGKPGILESDDLMNSAS-GLTG 1148

  Fly   201 SFPNTYTYTKALAEDVILREAGNLPL--SIFRPAIIMSTYKEPLVGWVDNLFGPLALCFGGARGI 263
            .    |..:|..|| .|:|.||...|  .|.||..:............|.|...|.    |:..:
Yeast  1149 G----YGQSKWAAE-YIIRRAGERGLRGCIVRPGYVTGASANGSSNTDDFLLRFLK----GSVQL 1204

  Fly   264 MRVTTVDPSAKISLVPADYCVNVALACAW---RTAEISVQNGKVTTPPIYAFAPSENNLMSYG-- 323
            .::..::.|  :::||.|:...|.:|.:.   :..|::|  .:||..|...|......|..||  
Yeast  1205 GKIPDIENS--VNMVPVDHVARVVVATSLNPPKENELAV--AQVTGHPRILFKDYLYTLHDYGYD 1265

  Fly   324 ----------NFIKSSIIYRDIIPLTKMLWYPFVLCISTTSLFPLAAFFLHTLP 367
                      ..:::|:|.|:                ...:|:||....|..||
Yeast  1266 VEIESYSKWKKSLEASVIDRN----------------EENALYPLLHMVLDNLP 1303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 86/379 (23%)
FAR-N_SDR_e 12..327 CDD:187547 77/337 (23%)
Sterile 364..454 CDD:281068 2/4 (50%)
LYS2NP_009673.1 alpha_am_amid 7..1379 CDD:274582 86/379 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I2873
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.