DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17560 and FAR7

DIOPT Version :9

Sequence 1:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_197634.1 Gene:FAR7 / 832303 AraportID:AT5G22420 Length:409 Species:Arabidopsis thaliana


Alignment Length:502 Identity:125/502 - (24%)
Similarity:192/502 - (38%) Gaps:162/502 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSEIQGFFKNKTVFLTGGTGFLGKVIIEKLLR-TTEVNRIYSLIRPKRGVPIEDRITTWAKDPV 64
            |:.....|.:|:|:.:||.:|||.||::|::|| ...|.|:|.|:|                   
plant     1 MEPNCVQFLENRTILVTGASGFLAKVLVERILRLQPNVKRLYLLVR------------------- 46

  Fly    65 FEVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISL--AI 127
                                          .||::            :|..|:|.||.|:.  ||
plant    47 ------------------------------ASDKK------------SAEQRYDVALGINTFGAI 69

  Fly   128 NVRATRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGELVSNK--- 189
            ||      |..||:..:....:||||.|. |     .||  |.|:   .:|..|:||.::.|   
plant    70 NV------LNFAKKCVKPKLLLHVSTVYV-C-----GER--PGHI---VEKHFAMGESLNGKNKV 117

  Fly   190 -------LLD-----------------------AMEPSLVGSFPNTYTYTKALAEDVILREAGNL 224
                   |.|                       .::.:.:..:||||.:|||:.|.::......:
plant   118 DINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYGWPNTYVFTKAMGEMLLGHYRETM 182

  Fly   225 PLSIFRPAIIMSTYKEPLVGWVDNL--FGPLALCFGGARGIMRVTTVDPSAKISLVPADYCVNVA 287
            |:.|.||.||.||:.:|..||::.|  ...:.:.:|  :||::...||......::|.|..||..
plant   183 PIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYG--KGILKCFLVDQKTVCDIIPVDMVVNAM 245

  Fly   288 LACAWRTAEISVQNGKVTTPPIYAFAPSENNLMSYGN--------FIKSSIIYRDIIPLTKMLWY 344
            :|.|   |:....:|..|   :|....|..|.:.|..        |:||.::.|:     .||..
plant   246 IAIA---ADHCHDSGSHT---VYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVGRN-----GMLIV 299

  Fly   345 PFVLCISTTSLFPLAAFFLHTLPGYFFDLL----------LRLKGRK----PILVDLYRKIHKNI 395
            |.|..|||.:.|.:.....:.||.....||          ..|..||    ..||.||:      
plant   300 PKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQRDKFALHNRKFKMAMRLVKLYK------ 358

  Fly   396 AVLGPFSSTTWNFDMTNTMELR-EAMSKQDRNLYDFDMAQLDWNDYF 441
                |:......||..|...|| :..:|....|:..:...:||.|||
plant   359 ----PYVLFKGIFDDKNMETLRIKNEAKDMEKLFGTNPKCIDWEDYF 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 123/500 (25%)
FAR-N_SDR_e 12..327 CDD:187547 87/360 (24%)
Sterile 364..454 CDD:281068 24/93 (26%)
FAR7NP_197634.1 PLN02996 1..402 CDD:215538 125/502 (25%)
FAR-N_SDR_e 12..289 CDD:187547 88/362 (24%)
Sterile 319..402 CDD:281068 24/93 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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