DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17560 and FAR5

DIOPT Version :9

Sequence 1:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_190041.2 Gene:FAR5 / 823580 AraportID:AT3G44550 Length:496 Species:Arabidopsis thaliana


Alignment Length:506 Identity:139/506 - (27%)
Similarity:223/506 - (44%) Gaps:106/506 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FFKNKTVFLTGGTGFLGKVIIEKLLRT-TEVNRIYSLIRPKRGVPIEDRITT--WAKDPVFEVLL 69
            |.:|||:.:||.||||.||.:||:||. ..|.::|.|:|.........|:.|  :.|: :|:||.
plant     8 FLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKE-LFKVLR 71

  Fly    70 RTKPD------ALQRVCPIAGDCLDPDLGISQSDQR-ILTAEVQIVIHGAATVRFDEALHISLAI 127
            :...|      ..::|..:.||.....|||:.|..| .:..|:.||::.|||..|||...:.|.|
plant    72 QNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNFDERYDVGLGI 136

  Fly   128 NVRATRLMLQLAKQMTQLVSFVHVSTAY---------------------SNCVVHDI-------A 164
            |......:|..||:..::...:||||||                     .|.:..||       .
plant   137 NTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFIMEEIRNENGLQLDINLERELMK 201

  Fly   165 ERFYPEHLN---CSSDKI-LAVGELVSNKLLDAMEPSLVGSFPNTYTYTKALAEDVILREAGNLP 225
            :|.  :.||   ||.:.| |::.||       .||.:.:..:||||.:||::.|.::.:...|||
plant   202 QRL--KELNEQDCSEEDITLSMKEL-------GMERAKLHGWPNTYVFTKSMGEMLLGKHKENLP 257

  Fly   226 LSIFRPAIIMSTYKEPLVGWVDNLFGPLALCFGGARGIMRVTTVDPSAKISLVPADYCVNVALAC 290
            |.|.||.:|.||..||..||::.|....::.....:|:::...||.::...::|.|...|..:..
plant   258 LVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITA 322

  Fly   291 AWRTAEISVQNGKVTTPPIYAFAPSENNLMSYGN--------FIKSSIIYRD--IIPLTKMLWYP 345
            |.:.|      |......:|....|..|.:::|.        |.|:.:..|:  :|.::|:.:.|
plant   323 AAKHA------GGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYFTKNPLRSRNGSLITVSKVRFIP 381

  Fly   346 FVLCISTTSLFPLAAFFLHTLPGYFFDLLLRLKGRKPILVDLY-------------RKIH---KN 394
                  |.:||.|.....:.||      |..||     |||:.             |||.   :.
plant   382 ------TMALFSLYMTLRYKLP------LQLLK-----LVDIIYPWRNGDKYGDKNRKIELVMRL 429

  Fly   395 IAVLGPFSSTTWNFDMTNTMEL-----REAMSKQDRNLYDFDMAQLDWNDY 440
            :.:..|:......||..||..|     .|.:...::.::|||...::|.||
plant   430 VELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGDY 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 139/506 (27%)
FAR-N_SDR_e 12..327 CDD:187547 104/364 (29%)
Sterile 364..454 CDD:281068 24/98 (24%)
FAR5NP_190041.2 PLN02996 1..495 CDD:215538 139/506 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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