DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17560 and FAR2

DIOPT Version :9

Sequence 1:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_011519049.1 Gene:FAR2 / 55711 HGNCID:25531 Length:535 Species:Homo sapiens


Alignment Length:504 Identity:169/504 - (33%)
Similarity:272/504 - (53%) Gaps:26/504 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEIQGFFKNKTVFLTGGTGFLGKVIIEKLLRTT-EVNRIYSLIRPKRGVPIEDRITTWAKDPVFE 66
            |.|..|:..|::.:||.|||||||::|||.||: ::..||.|:|||.|..::.|:.......:||
Human    22 STIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFE 86

  Fly    67 VLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAINVRA 131
            .:....|:..:::..|..|....|..||:.|.:.|.:...|:.|.|||||||:.|..::.:||.|
Human    87 KVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTA 151

  Fly   132 TRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSD--KILAVGELVSNKLLDAM 194
            ||.:|.:|.||.:|.:|:|:|||||||.:..|.|..||    |..:  ||:...|.:.:.::|.:
Human   152 TRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYP----CPVEPKKIIDSLEWLDDAIIDEI 212

  Fly   195 EPSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALCFGG 259
            .|.|:..:||.|||||||.|.|:.:|:.||.::|.||:|:.:|::||..|||||:.||..:....
Human   213 TPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIAT 277

  Fly   260 ARGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQNGKVTTPPIYAFAPSENNLMSYGN 324
            .:|.:|.....|.|...::|.|..||:.||..|.||   |...|.|.  :|.......|..::..
Human   278 GKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTA---VHRPKSTL--VYHITSGNMNPCNWHK 337

  Fly   325 FIKSSIIYRDIIPLTKMLWYPF------VLCISTTSLFPLAAFFLHTLPGYFFDLLLRLKGRKPI 383
            .....:...:.||..:    ||      ....|.||.:..|.  .|..|...:|..|||.||||.
Human   338 MGVQVLATFEKIPFER----PFRRPNANFTSNSFTSQYWNAV--SHRAPAIIYDCYLRLTGRKPR 396

  Fly   384 LVDLYRKIHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFKAAMYGM 448
            :..|..::.:.:::|..|.:.:|.:...||..|...:|.:|:.:::||:.||:|.:|.:..:.|:
Human   397 MTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGV 461

  Fly   449 RLYIGKEKPTAESIAKGLKLRMRLKVLHYAFASSLVALAGYILYSLARL 497
            :.|:.||  ....|.|..:...||:.:||.|.::|..:|..:|.:.:::
Human   462 KKYLLKE--DMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLLIARSQM 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 154/446 (35%)
FAR-N_SDR_e 12..327 CDD:187547 119/317 (38%)
Sterile 364..454 CDD:281068 27/89 (30%)
FAR2XP_011519049.1 PLN02996 22..467 CDD:215538 157/459 (34%)
FAR-N_SDR_e 31..335 CDD:187547 119/312 (38%)
Sterile 377..467 CDD:281068 27/89 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157510
Domainoid 1 1.000 93 1.000 Domainoid score I7542
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.850

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