DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17560 and CG17562

DIOPT Version :9

Sequence 1:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster


Alignment Length:499 Identity:314/499 - (62%)
Similarity:398/499 - (79%) Gaps:0/499 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSEIQGFFKNKTVFLTGGTGFLGKVIIEKLLRTTEVNRIYSLIRPKRGVPIEDRITTWAKDPVF 65
            ||::||..|::|||||||.|||||||:||||||||||.|||.||||||||.|:|||.||:||.||
  Fly     1 MDTDIQRCFRSKTVFLTGATGFLGKVVIEKLLRTTEVKRIYVLIRPKRGVEIKDRIITWSKDAVF 65

  Fly    66 EVLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAINVR 130
            |:||::||:||||||||||||||.|||||::|:|:|.:||||||||||||||:|.||::||||.|
  Fly    66 ELLLKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTR 130

  Fly   131 ATRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFYPEHLNCSSDKILAVGELVSNKLLDAME 195
            ||:||:||||:|.||.:|||||||:||||:::|.|.||||||||||||:||:.||:|::|||.||
  Fly   131 ATKLMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDELLDNME 195

  Fly   196 PSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALCFGGA 260
            .:|:|||||||||||||||||||:|||.|||.|||||:|::.:|||:.||:||::||:|:.||.|
  Fly   196 QALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAILFGVA 260

  Fly   261 RGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQNGKVTTPPIYAFAPSENNLMSYGNF 325
            ||::|:.|:|..|:.||||.|||.|:.|||.|:|.....:.|...||.||..||.|.|.:::|.|
  Fly   261 RGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNEMGTQETPLIYQLAPIEQNKITHGEF 325

  Fly   326 IKSSIIYRDIIPLTKMLWYPFVLCISTTSLFPLAAFFLHTLPGYFFDLLLRLKGRKPILVDLYRK 390
            |:.::..|...|||||:||||:.||:...||||||||.||||.|||||.|.|.||||.||.:|:|
  Fly   326 IRHALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHTLPAYFFDLALWLSGRKPRLVKVYQK 390

  Fly   391 IHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFKAAMYGMRLYIGKE 455
            |||.:.:||||:..:|.|||.||..||:.||::||.:|.|||..|:|.:||..|:.|||.::|.|
  Fly   391 IHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALRGMRQFLGNE 455

  Fly   456 KPTAESIAKGLKLRMRLKVLHYAFASSLVALAGYILYSLARLVV 499
            .||.||||:|.||..|||:||:.....|..:|...|:||.|::|
  Fly   456 APTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALWSLVRILV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17560NP_650567.1 PLN02996 1..441 CDD:215538 285/439 (65%)
FAR-N_SDR_e 12..327 CDD:187547 215/314 (68%)
Sterile 364..454 CDD:281068 50/89 (56%)
CG17562NP_650566.1 PLN02996 10..442 CDD:215538 281/431 (65%)
FAR-N_SDR_e 12..329 CDD:187547 216/316 (68%)
FAR_C 362..452 CDD:176924 51/89 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466696
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26995
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
1110.910

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