DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17560 and CG30427

DIOPT Version :10

Sequence 1:NP_650567.1 Gene:CG17560 / 42022 FlyBaseID:FBgn0038450 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_726498.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster


Alignment Length:489 Identity:147/489 - (30%)
Similarity:248/489 - (50%) Gaps:39/489 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEIQGFFKNKTVFLTGGTGFLGKVIIEKLLRTT-EVNRIYSLIRPKRGVPIEDRITTWAKDPVFE 66
            |.:|.::|:||:|:||.:||:|||::||||.:. .:..:..:.|||||...|.|:....|.|:|:
  Fly     6 SPVQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQ 70

  Fly    67 VLLRTKPDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAINVRA 131
            .:...:|:.|:||....||.....||:|....:.:|....||.|.|||::.:..|..::.:|:..
  Fly    71 RIKDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLG 135

  Fly   132 TRLMLQLAKQMTQLVSFVHVSTAYSNCVVHDIAERFY-----PEHLNCSSDKILAVGELVSNKLL 191
            ||..|.:||:|.||.:|:|:|||:.||....:.|:.|     ||.|       :.:.|.:..|.|
  Fly   136 TRRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDL-------MRLAEWMDVKTL 193

  Fly   192 DAMEPSLVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALC 256
            ||:.|.|:...||||||:|.|||.::.....::|:.|.||:|:.....|||.|||||:.||..:.
  Fly   194 DAITPDLLKPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVL 258

  Fly   257 FGGARGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQNGKVTTPPIYAFAPSENN--- 318
            .|..:|::|....:...|..::|.|..:|..:...:..   |:...:....|:|.....:..   
  Fly   259 IGAGKGVIRSMICNGELKSEVIPVDIAINGLILLPYHN---SLAEKRPLQIPVYNLTVDDAKKRT 320

  Fly   319 ---LMSYGNFIKSSIIYRDI---IPLTKMLWYPFVLCISTTSLFPLAAFFLHTLPGYFFDLLLRL 377
               :|..|         ||:   .|....||||.....|:.....:.......||.|..|.||.:
  Fly   321 WKWIMDVG---------RDLGIKYPFEVGLWYPDGNMTSSKFYHTICTILFMWLPAYLIDFLLLI 376

  Fly   378 KGRKPILVDLYRKIHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDWNDYFK 442
            .|::..::.:..||...:.||..|::.:|:|..|:..::.:.:...||.::..:...:|..:|.|
  Fly   377 FGQRRFMIRVQTKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDRRIFKINTDDVDDYEYMK 441

  Fly   443 AAMYGMRLYIGKEKPTAESIAKGLKLRMRLKVLH 476
            .::.|.|.|:.||..|  |:.|.   |::|:.::
  Fly   442 VSILGGRQYVMKEPLT--SLPKS---RIQLRFMY 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17560NP_650567.1 FAR-N_SDR_e 12..327 CDD:187547 106/326 (33%)
Sterile 363..454 CDD:460779 23/90 (26%)
CG30427NP_726498.1 FAR-N_SDR_e 15..321 CDD:187547 104/315 (33%)
Sterile 362..453 CDD:460779 23/90 (26%)

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