Protein Alignment CG17562 and FarO

DIOPT Version :10

• Sequence 1: NP_650566.1
• Gene: CG17562 / 42021
• FlyBaseID: FBgn0038449
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_652021.1
• Gene: FarO / 45707
• FlyBaseID: FBgn0023550
• Length: 504
• Species: Drosophila melanogaster
• Alignment Length: 516
• Identity: 141/516 - (27%)
• Similarity: 249/516 - (48%)
• Gaps: 54/516 - (10%)

  Fly     4 DIQRCFRSKTVFLTGATGFLGKVVIEKLLRTTEVKRIYVLIRPKRGVEIKDRIITWSKDAVFELL 68
            :::..|....:|:||.:|.:||.::|||||:..|:|||||:||::.:..:.|::...:..||.:|
  Fly     8 EMEEFFEDSEIFVTGGSGVVGKALVEKLLRSCNVRRIYVLLRPRKQLTAEQRLVRLRQATVFHVL 72

  Fly    69 LKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTRATK 133
            ...|||.|.::..:.||.....|||..:..:.:.. |.:|.|.||||||:|||..|:.:|...|.
  Fly    73 AVQKPEELDKIVAVPGDVSLPGLGIDPSMMQRMKG-VSLVYHCAATVRFDEPLREAVRLNVGGTL 136

  Fly   134 LMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLN---CSSDKVLAMAELMSDE-LLDNM 194
            ..::.|:.:.||.||:||||.:||..:..::..:|...::   |     |.|.:.::|: :|:.:
  Fly   137 EALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPMDWRLC-----LRMIDDVADDGMLNAL 196

  Fly   195 EQALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAILFGV 259
            .:.|:..||||||:||.|||.::......||:.::||::::.|.::|..|:..::.|.|.:...|
  Fly   197 TRKLIMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALV 261

  Fly   260 ARGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNEMGTQETPLIYQLAP------IEQN 318
            ..|:|:...:.......:.|.|......|..|        :||..    ||:..|      ...:
  Fly   262 GAGILKTVYLGKDIRLDITPQDIGIKSMLCYT--------KMGYD----IYRQGPPADLPVFLSS 314

  Fly   319 KITHGEFIRH----------ALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHTLPAYFFDL 373
            ..||   :.|          .||...:....|.:..|..|.....|.:....|....|||...||
  Fly   315 SCTH---VPHTFTQIAEQMDTLDLWRDVAFEKNLMIPGCHYTDKRWAYQFLVFTKQILPALILDL 376

  Fly   374 ALWLSGRKPRLVKVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWK 438
            .|.:.|:||.|:...:|.::||.::.||...:|  |......:.......:...:.||  :.|..
  Fly   377 LLRIFGQKPVLMSAVRKAYQTLEVMQPFMFNNW--DSPGVSDMETLSKHGEGSAFNFD--AFNHP 437

  Fly   439 E---YFVQA----LRGMRQFLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALW 492
            :   ..:|:    |..:|..|..|  .|:::.:.|::::....|:.:|:..|.:..:|.||
  Fly   438 DIHGLVIQSCSNMLHSIRTHLLRE--DPKTLERSKRILRIKVFLYRLLRLFLLYKLILWLW 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17562	NP_650566.1	FAR-N_SDR_e	12..329	CDD:187547	100/336 (30%)
		Sterile	363..452	CDD:460779	23/95 (24%)
FarO	NP_652021.1	FAR-N_SDR_e	18..328	CDD:187547	100/330 (30%)
		Sterile	379..>410	CDD:460779	10/32 (31%)