DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17562 and CG5065

DIOPT Version :10

Sequence 1:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_611143.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster


Alignment Length:501 Identity:187/501 - (37%)
Similarity:283/501 - (56%) Gaps:38/501 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IQRCFRSKTVFLTGATGFLGKVVIEKLLRT-TEVKRIYVLIRPKRGVEIKDRIITWSKDAVFELL 68
            |.:.:..::||:||.|||:|||::|||||: .|::.||:|||||||.|:..|:.......:||.|
  Fly   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESL 183

  Fly    69 LKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVALAINTRATK 133
            .:.||:.|.:|.||:||....:|||||.|:.||...|.:|.|.||||:|:|.|.:::.||...||
  Fly   184 RQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTK 248

  Fly   134 LMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDELLDNMEQAL 198
            .:::|...|..|:|.:|||||:.||...::.|..|....|  .|.::::...:.:::||.:...|
  Fly   249 RLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYN--PDDIISLINWLPEDILDQLTPRL 311

  Fly   199 LGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAILFGVARGV 263
            :|..|||||:||||||.::|||||.||:.|.||:::.|:..||.:||:||..||..::..:|:|:
  Fly   312 IGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGM 376

  Fly   264 LRIATIDHHAEASLVPVDYCANLTLACTWKTIV-EGNEMGTQETPLIYQLAPIEQNKITHGEFIR 327
            .|....:.:..|.:||||...||.:|..|:|.. :.|.:      |||.....::|.|...||::
  Fly   377 FRTMMCEKNYVADMVPVDIVINLMIAAAWRTATRKSNNL------LIYNCCTGQRNPIIWSEFVK 435

  Fly   328 HALDGRTNCPLTKMIWYP-----------FIHCITVPWLFPLAAFFYHTLPAYFFDLALWLSGRK 381
            ||:......||...:|||           .::||.           .|.||||..|....:.|:|
  Fly   436 HAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIA-----------KHFLPAYILDGVARIMGKK 489

  Fly   382 PRLVKVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALR 446
            |.:|.|..||.|.:..|..||.:.|||...|...|...:|.:||.|:.||:..:||.:|..:.:.
  Fly   490 PFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYVL 554

  Fly   447 GMRQFLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALW 492
            |.|:||..:  .|||:...:|.:.||..||.:.:    .||:|..|
  Fly   555 GFREFLFKQ--RPESLPASRKRMLRLYYLHQLTK----LVAVLLTW 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17562NP_650566.1 FAR-N_SDR_e 12..329 CDD:187547 130/318 (41%)
Sterile 363..452 CDD:460779 33/88 (38%)
CG5065NP_611143.1 FAR-N_SDR_e 126..445 CDD:187547 132/326 (40%)
Sterile 471..562 CDD:460779 35/90 (39%)

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