DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17562 and CG1441

DIOPT Version :9

Sequence 1:NP_650566.1 Gene:CG17562 / 42021 FlyBaseID:FBgn0038449 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster


Alignment Length:500 Identity:169/500 - (33%)
Similarity:275/500 - (55%) Gaps:19/500 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DTDIQR---CFRSKTVFLTGATGFLGKVVIEKLLRTT-EVKRIYVLIRPKRGVEIKDRIITWSKD 62
            |.::.|   ||:.:::|:||.|||||||::|||||:. .:||||:|||||:|.:.::||....::
  Fly    22 DNEVDRIAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQN 86

  Fly    63 AVFELL--LKSKPEALQRVCPIAGDCLDFDLGISENDRRLLASEVQIVIHGAATVRFNEPLHVAL 125
            .:|:.:  ::.:...||:|..||||.|...|||||.|...|..||.||.|.||||||:|||..|:
  Fly    87 VLFDQVKQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPLRNAV 151

  Fly   126 AINTRATKLMIQLAKEMRQLEAFVHVSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDEL 190
            .:|||.||.|::||..::.|:.|.:.|||:.:..:..:.|.  |........||:...|.::|:.
  Fly   152 FMNTRGTKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEK--PYDPPADPHKVMQACEWLTDDE 214

  Fly   191 LDNMEQALLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAI 255
            :..:|:.:||:.||||.|||:|||.:::::...||..|.||:::|...||||.||.||:.||..:
  Fly   215 VATIERKVLGAIPNTYAYTKSLAEALVVEKFEELPAVILRPSIVIPIWKEPIPGWTDNINGPTGL 279

  Fly   256 LFGVARGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNEMGTQETPLIYQLAPIEQNKI 320
            |.|..:||:|....:.......:|||...|..|..:|:.|.    .||.:|..:..:......|:
  Fly   280 LIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWRNIT----AGTDKTNRVAHMTSSNDIKV 340

  Fly   321 THGEFI---RHALDGRTNCPLTKMIWYPFIHCITVPWLFPLAAFFYHTLPAYFFDLALWLSGRKP 382
            :..|.|   |..::.:.  ||..:.|||.....:..|:..:....:..:||.|.|..||:....|
  Fly   341 SWAEIIELGRWVIENKV--PLNGVAWYPGGSMKSNYWVHFICMVLFQWMPALFVDALLWILRYPP 403

  Fly   383 RLVKVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALRG 447
            .|.:|..:|:|...:...:|...|.||......||:.|:.::||.|..:.:.|:..:||...:..
  Fly   404 VLCRVQNRIYKGFEVFEYYANNVWNFDNSEAVKLRKLMNNKERRTYVIEKIELDLIDYFTNCVLC 468

  Fly   448 MRQFLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALW 492
            .|:.:..|  :.|||...::.:|.:.::..:.:|:..|..|..|:
  Fly   469 ARRLILKE--SDESIPAARRHMKVMWVVDKVYKGIWIFGILYMLY 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17562NP_650566.1 PLN02996 10..442 CDD:215538 154/437 (35%)
FAR-N_SDR_e 12..329 CDD:187547 125/322 (39%)
FAR_C 362..452 CDD:176924 25/89 (28%)
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 158/447 (35%)
FAR-N_SDR_e 35..348 CDD:187547 124/318 (39%)
Sterile 385..475 CDD:281068 25/89 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466775
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

Return to query results.
Submit another query.