DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10345 and SCARB1

DIOPT Version :9

Sequence 1:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001354910.1 Gene:SCARB1 / 949 HGNCID:1664 Length:552 Species:Homo sapiens


Alignment Length:525 Identity:143/525 - (27%)
Similarity:232/525 - (44%) Gaps:83/525 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SAALGMTLLF---FGSLVIISDPLQSILDTQ----LSLKPGTLLHRLWLLPPLDVYINVYMFNYT 74
            :.|||:..|.   .|:::|:..|  |::..|    :.:.|.:|...:|...|:..|::||.|:..
Human    11 AGALGVAGLLCAVLGAVMIVMVP--SLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDVM 73

  Fly    75 NVDEFTSGRASKLQLQEVGPYVYKEVLSNHNVTYNESNNTITYSPKREYVFAPERSVGDPKIDRI 139
            |..|...|  .|.|::|.|||||:|.....|:|:| :|:|:::...|.:.|.|.:|.|. :.|.|
Human    74 NPSEILKG--EKPQVRERGPYVYREFRHKSNITFN-NNDTVSFLEYRTFQFQPSKSHGS-ESDYI 134

  Fly   140 RAPNIPLMGVTTLASSLSMFAALGLSAITRQLNSQPMLEMSVHDYMWGYEDHLVELASRFVPNWI 204
            ..|||.::|...:..:..|...|.::.....|..:..:..:|.:.||||:|.||.|.:::.|...
Human   135 VMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNLINKYFPGMF 199

  Fly   205 DF-SSFGIMEKLFREGNESNVFNMNLPEPKDKYGMRMTDAPRGYTVDSINGERGFKGWQYNEETN 268
            .| ..||:..:|  ..::|.:|.:..       |::  :..|.:.||..||......|..::   
Human   200 PFKDKFGLFAEL--NNSDSGLFTVFT-------GVQ--NISRIHLVDKWNGLSKVDFWHSDQ--- 250

  Fly   269 GTMCNRIWGSHDATLFPLDMDENDEFFLYRRTFCRRLPVKFNRTTTFNGLDAFEFVMEPDSFDSE 333
               ||.|.|: ...::|..|........|....||.:.:.:..:..|.|:..:.||.....|   
Human   251 ---CNMINGT-SGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLF--- 308

  Fly   334 VDNANSSCYCKNN---RCLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPFDGLQPNVSRFTS 395
               ||.|.|..|.   .||:.|:.|||.|.::.||.:::|||::|||.|.|...||.||....:.
Human   309 ---ANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSL 370

  Fly   396 TFVVQPQLGAPMQGTHLRLQANQVVGKVNFNRMMTPFENMILPLLWV---------DLNIDVLCL 451
            ...:.|..|.|| ...::||.:..:..|.........|.::|||||.         .|:.....|
Human   371 FLDIHPVTGIPM-NCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETLHTFYTQL 434

  Fly   452 TLR-LLIHGIKWGFPLLQWSAALGMLLAGVYQLC----------------SALLLCF-------- 491
            .|. .::|..:  :.||    |||.:|..|..:|                |..|.|:        
Human   435 VLMPKVMHYAQ--YVLL----ALGCVLLLVPVICQIRSQVGAGQRAARADSHSLACWGKGASDRT 493

  Fly   492 -WPTA 495
             ||||
Human   494 LWPTA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10345NP_650563.2 CD36 21..488 CDD:279474 135/503 (27%)
SCARB1NP_001354910.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148208
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.850

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