DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10345 and scarb2b

DIOPT Version :9

Sequence 1:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_009299911.1 Gene:scarb2b / 564077 ZFINID:ZDB-GENE-170406-1 Length:523 Species:Danio rerio


Alignment Length:507 Identity:133/507 - (26%)
Similarity:231/507 - (45%) Gaps:61/507 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ALGMTLLFFGSLVIISDPLQSI----LDTQLSLKPGTLLHRLWLLPPLDVYINVYMFNYTNVDEF 79
            |.|..||..|..:..|...|::    |..:::|..|:.:...|..||..||:..:.||.||.:.|
Zfish    13 AAGALLLLAGIALFASGLFQTLIHNKLKKEITLTEGSKVFATWKNPPPPVYMEFFFFNVTNPEAF 77

  Fly    80 TSGRASKLQLQEVGPYVYKEVLSNHNVTYNESNNTI-TYSPKREYVFAPERSVGDPKIDRIRAPN 143
            ..|.| |.:|.|:|||.|:|....|||::.::...: .|:|| .:||.||:|||||.:|.:...|
Zfish    78 LKGEA-KARLSEMGPYTYREYRPKHNVSFVDNGTKVAAYTPK-VFVFVPEKSVGDPSVDMVTTVN 140

  Fly   144 IPLMGVTTLASSLSMFAALGLSAITRQLNSQPMLEMSVHDYMWGYEDHLVELASRFVPNWIDFSS 208
            ||.:.|...........:..:|...:.:.::..:..:|.:.:||::|.|:.......|...:|  
Zfish   141 IPAVAVMNRIKGAGFLVSSAMSLYMKSIGAEMFMTHTVDELLWGFKDPLLTKLRSIKPETDEF-- 203

  Fly   209 FGIMEKLFREGNESNVFNMNLPEPKDKYGMRMTDAPRGYTVDSINGERGFKGWQYNEET--NGTM 271
            ||:|  |.:.|::...|..:..|      ....|..|.:|   ..||:....|:.|:..  ||| 
Zfish   204 FGLM--LHKNGSDDGEFVYHTGE------HNYLDYGRIFT---WKGEKLMSFWKTNQSNMINGT- 256

  Fly   272 CNRIWGSHDATLFPLDMDENDEFFLYRRTFCRRLPVKFNRTTTFNGLDAFEFVMEPDSFDSEVDN 336
                    |.:.|...:.:.:...::....||.:.::|.:.....|:.|:.|........|..:|
Zfish   257 --------DGSAFHPFLTKEERLDVFTADLCRSIHMRFEKEVEVKGIPAYRFTPPRAVLASGTNN 313

  Fly   337 ANSSCYCKN-NRCLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPFDGLQPNVSRFTSTFV-V 399
            ..:..:|.. .:||..||.:||.|....|:.:::|||...|...::..:||.| |.....||: :
Zfish   314 PENEGFCLTPKKCLDDGVLDVSVCRQGAPVVVSFPHFHLGDEKYVQAVEGLSP-VHEQHQTFLDL 377

  Fly   400 QPQLGAPMQGTHLRLQANQVVGKVNFNRMMTPFENMILPLLWVDLNIDV----------LCLTLR 454
            .|.:|.|::... |.|.|..:.:|....|....|:.|.|:::::.::.:          |.|.:.
Zfish   378 NPTMGVPVRAMK-RAQINIHLERVTGFPMTRNLESTIFPIIFLNESVVIDNASAERIQKLLLVVT 441

  Fly   455 LLIHGIKWGFPLLQWSAALGMLLAGVYQLCSALLLCFWPTARQFQKVDQVER 506
            |:.|     |||:  ..|||::|     |..|::|    ..|.:|...:|:|
Zfish   442 LVSH-----FPLI--LVALGVIL-----LIVAVIL----AVRYYQNKTEVKR 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10345NP_650563.2 CD36 21..488 CDD:279474 127/485 (26%)
scarb2bXP_009299911.1 CD36 30..463 CDD:279474 122/470 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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