DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10345 and Cd36

DIOPT Version :9

Sequence 1:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_113749.2 Gene:Cd36 / 29184 RGDID:2301 Length:472 Species:Rattus norvegicus


Alignment Length:454 Identity:113/454 - (24%)
Similarity:208/454 - (45%) Gaps:61/454 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RNAKLLRSAALGMTLLFFGSLVI-ISDPL-QSILDTQLSLKPGTLLHRLWLLPPLDVYINVYMFN 72
            ||..|:..|.:|..|..||.::: :.|.| :..:..::.|:.||:..:.|:.....||...::|:
  Rat     5 RNCGLITGAVIGAVLAVFGGILMPVGDLLIEKTIKREVVLEEGTIAFKNWVKTGTTVYRQFWIFD 69

  Fly    73 YTNVDEFTSGRASKLQLQEVGPYVYK-EVLSNHNVTYNESNNTITYSPKREYVFAPERSVGDPKI 136
            ..|.:| .:..:||:::::.|||.|: ..|:..|:|.:..::|:::......:|.|..|||... 
  Rat    70 VQNPEE-VAKNSSKIKVKQRGPYTYRVRYLAKENITQDPKDSTVSFVQPNGAIFEPSLSVGTEN- 132

  Fly   137 DRIRAPNIPLMGVTTLASS---LSMFAALGLSAITRQLNSQPMLEMSVHDYMWGYEDHLVELASR 198
                 .|..::.:...|:.   .:.|....|:::.::..|......|:.:.:|||:|..:.|   
  Rat   133 -----DNFTVLNLAVAAAPHIYTNSFVQGVLNSLIKKSKSSMFQTRSLKELLWGYKDPFLSL--- 189

  Fly   199 FVPNWIDFSSFGIMEKLFREGNES-----NVFNMNLPEPKDKYGMRMTDAPRGYTVDSINGERGF 258
             ||..|. ::.|:    |...|.:     .|||     .||       :..:...:|:..|:|..
  Rat   190 -VPYPIS-TTVGV----FYPYNNTVDGVYKVFN-----GKD-------NISKVAIIDTYKGKRNL 236

  Fly   259 KGWQ-YNEETNGTMCNRIWGSHDATLFPLDMDENDEFFLYRRTFCRRLPVKFNRTTTFNGLDAFE 322
            ..|: |.:..|||         ||..||..::::.....:....||.:...|.......|:..:.
  Rat   237 SYWESYCDMINGT---------DAASFPPFVEKSRTLRFFSSDICRSIYAVFGSEVNLKGIPVYR 292

  Fly   323 FVMEPDSFDSEVDNANSSCYCK----NNRCLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPF 383
            ||:..::|.|.:.|.::.|:|.    :|.|...||.::..|....|:.|:.|||:||.|.:.||.
  Rat   293 FVLPANAFASPLQNPDNHCFCTEKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPI 357

  Fly   384 DGLQPNVSRFTSTFVVQPQLGAPMQGTHLRLQANQVVGKVNFNRMMTPFENM----ILPLLWVD 443
            :||.||.....:...|:|..|..:|... |||.|.:|...   |.:...:|:    |:|:||::
  Rat   358 EGLNPNEDEHRTYLDVEPITGFTLQFAK-RLQVNILVKPA---RKIEALKNLKRPYIVPILWLN 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10345NP_650563.2 CD36 21..488 CDD:279474 109/443 (25%)
Cd36NP_113749.2 CD36 14..463 CDD:395898 109/445 (24%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000250 93..120 5/26 (19%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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