DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10345 and scav-1

DIOPT Version :9

Sequence 1:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_508919.2 Gene:scav-1 / 180812 WormBaseID:WBGene00015389 Length:563 Species:Caenorhabditis elegans


Alignment Length:574 Identity:128/574 - (22%)
Similarity:210/574 - (36%) Gaps:138/574 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGMTLLFFGSLVIISDPLQSILDTQLS-------LKPGTL--LHRLWLLPPLDVYINVYMFNYTN 75
            :|..||..| |||:.:...:|::.|::       ...|||  ....|:.......:..::::|||
 Worm    18 IGAALLVAG-LVIVLNVFPNIVNNQINDSKVLGLNADGTLNSFTDSWVNSKYISTMQYWVYDYTN 81

  Fly    76 VDEFTSG---RASKLQLQEVGPYVYKEVLSNHNVTYNESNNTITYSPKREYVFAPERSVG--DPK 135
                |.|   ||....::|.|||.:.|:|:...:.::|:...:.:...:.:||.|.:|..  ||.
 Worm    82 ----TIGIMNRAIYPDVREKGPYAFDEILTMDKLNFSENGEFMEFRQIQTFVFNPNKSCAGCDPY 142

  Fly   136 IDRIRAPNI-------------------PLMGVTTLA------------SSLSMFAALGLSAITR 169
            .|::..|::                   ||......|            |:|.......|..:..
 Worm   143 KDKVLIPDMGFQVGIDQIDTVIEGILKNPLAATICHAIMKGKPNANQTCSNLGALIEGELGTLIS 207

  Fly   170 QLNSQPMLEMSVHDYMW-GYEDHLVELASRFVPNWIDFSSFGIMEKLFREGNESNVFNMNLPEPK 233
            ..|..|...::|...:: ||:       :.||..::| .:.|::..||.          ..|:|.
 Worm   208 LFNVSPFTTVTVDQLLFSGYK-------TPFVEKFLD-EALGMLHFLFG----------TAPKPL 254

  Fly   234 DKYGMRMTDAPRGYTVDSIN----GERGFKGWQYNEETNGTMCNRIWGSHDATLFPL-------- 286
            |...:::.  |...|.|.||    |:.......|..|......|.::.|...||.|:        
 Worm   255 DDPPIQLN--PLNGTSDIINTVLTGKTDPLKAGYMTEFRSISNNSLFNSIGNTLPPMWWPYANKT 317

  Fly   287 -DMDENDEFFL------YRRTF--------------CRRLPVKFNRTTTFNGLDAFEFVMEPDSF 330
             ..|.|....|      |.:.|              ||.:...|:|..|..|...:.|||.|..|
 Worm   318 YCKDPNSALVLTGTNGDYFKNFVKKTDILPAFVSDVCRTIHFVFDREVTVKGFKGYRFVMPPTQF 382

  Fly   331 DSEVDNANSSC---------YCKNNRCLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPFDGL 386
            |..:|.....|         |...:.||..|:.::|.|... |:.::.|||..|...:.:.....
 Worm   383 DYSLDENCGYCIPLKYGSYEYPAQSACLPSGLLDISQCTGG-PIIMSKPHFYQASKVVSKFVPRF 446

  Fly   387 QPNVSRFTSTFVVQPQLGAPMQGTHLRLQANQVVGKVNFNRMMTPFENMILPLLWV------DLN 445
            :|......:...::|..|..:| ...|||.|.:|.:....|..:.......||.||      |.|
 Worm   447 KPTYDNDETMLDIEPNTGTVLQ-AQKRLQINMLVNQFKHIRSYSVMRPGAYPLAWVNESFYMDQN 510

  Fly   446 -IDVL---CLTLRLLIHGIKWGFPLLQWSAALGMLLAGVYQLCSALLL----CF 491
             ||.|   ..|....::.|.|        .|:| |.||:..|...:::    ||
 Worm   511 TIDQLNSQLFTPVSTVNTICW--------IAVG-LGAGLIALSIVMVIVSFCCF 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10345NP_650563.2 CD36 21..488 CDD:279474 126/564 (22%)
scav-1NP_508919.2 CD36 19..546 CDD:279474 126/562 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.