DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scp2 and AT5G08580

DIOPT Version :9

Sequence 1:NP_524381.1 Gene:Scp2 / 42015 FlyBaseID:FBgn0020907 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001332577.1 Gene:AT5G08580 / 830759 AraportID:AT5G08580 Length:391 Species:Arabidopsis thaliana


Alignment Length:84 Identity:22/84 - (26%)
Similarity:35/84 - (41%) Gaps:29/84 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 WTGLRSKA--------------DKDNDGQVSVDE-----WCNMWD--AYAKDPSSVMDWQNAYMN 106
            || ::|.|              |::.||.:|..|     |....|  ::..|    |.|   :..
plant   160 WT-MQSSAKEVVHRTQRDLDVHDRNKDGFISFSEYEPPSWVRKSDNNSFGYD----MGW---WKE 216

  Fly   107 FMFDLEDASHDGGIDVTEF 125
            ..|:..||:.||.:::|||
plant   217 EHFNASDANGDGLLNLTEF 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scp2NP_524381.1 EFh 10..87 CDD:298682 10/42 (24%)
EF-hand_7 14..86 CDD:290234 10/41 (24%)
FRQ1 71..163 CDD:227455 18/62 (29%)
AT5G08580NP_001332577.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10827
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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