DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scp2 and myd

DIOPT Version :10

Sequence 1:NP_524381.1 Gene:Scp2 / 42015 FlyBaseID:FBgn0020907 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_732406.1 Gene:myd / 42303 FlyBaseID:FBgn0051475 Length:418 Species:Drosophila melanogaster


Alignment Length:111 Identity:22/111 - (19%)
Similarity:43/111 - (38%) Gaps:27/111 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 MMEIWTGLRSKADKDNDGQVSVDEWCNMWDAYAKDPSSVM----------DWQNAYMNFMFDLED 113
            ::|:...|..:.|:|.|.|::::|:.   |....|...:|          :.:..:...:    |
  Fly   290 LLELVDDLLRQFDQDGDDQLTLEEFS---DLNVDDDDDLMRKSLISKTLVERREEFKRII----D 347

  Fly   114 ASHDGGIDVTEFTLVCSSYGLEKT------ECEEAFAKMSQGQSEV 153
            .:|||..|..|..    :|...||      |....|:...:.:.|:
  Fly   348 KNHDGKADRGELL----NYVNPKTPRYALQEAATLFSLCDENKDEL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scp2NP_524381.1 FRQ1 5..169 CDD:444056 22/111 (20%)
mydNP_732406.1 EFh_CREC 160..403 CDD:330175 22/111 (20%)
EF-hand motif 160..188 CDD:320023
EF-hand motif 198..228 CDD:320023
EF-hand motif 256..285 CDD:320023
EF-hand motif 293..322 CDD:320023 7/31 (23%)
EF-hand motif 338..367 CDD:320023 7/36 (19%)
EF-hand motif 374..403 CDD:320023 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.

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