DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scp2 and CG31475

DIOPT Version :9

Sequence 1:NP_524381.1 Gene:Scp2 / 42015 FlyBaseID:FBgn0020907 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001262725.1 Gene:CG31475 / 42303 FlyBaseID:FBgn0051475 Length:418 Species:Drosophila melanogaster


Alignment Length:111 Identity:22/111 - (19%)
Similarity:43/111 - (38%) Gaps:27/111 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 MMEIWTGLRSKADKDNDGQVSVDEWCNMWDAYAKDPSSVM----------DWQNAYMNFMFDLED 113
            ::|:...|..:.|:|.|.|::::|:.   |....|...:|          :.:..:...:    |
  Fly   290 LLELVDDLLRQFDQDGDDQLTLEEFS---DLNVDDDDDLMRKSLISKTLVERREEFKRII----D 347

  Fly   114 ASHDGGIDVTEFTLVCSSYGLEKT------ECEEAFAKMSQGQSEV 153
            .:|||..|..|..    :|...||      |....|:...:.:.|:
  Fly   348 KNHDGKADRGELL----NYVNPKTPRYALQEAATLFSLCDENKDEL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scp2NP_524381.1 EFh 10..87 CDD:298682 7/27 (26%)
EF-hand_7 14..86 CDD:290234 7/26 (27%)
FRQ1 71..163 CDD:227455 20/99 (20%)
CG31475NP_001262725.1 EF-hand_7 160..224 CDD:290234
EF-hand_7 296..363 CDD:290234 15/77 (19%)
EFh 301..360 CDD:298682 14/65 (22%)
EFh 344..398 CDD:298682 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10827
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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