DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14903 and primo-2

DIOPT Version :10

Sequence 1:NP_650561.1 Gene:CG14903 / 42014 FlyBaseID:FBgn0038446 Length:119 Species:Drosophila melanogaster
Sequence 2:NP_001027188.1 Gene:primo-2 / 3772427 FlyBaseID:FBgn0040076 Length:164 Species:Drosophila melanogaster


Alignment Length:76 Identity:18/76 - (23%)
Similarity:30/76 - (39%) Gaps:18/76 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PLGAVIAQSCHATAAV---IHLNSEDADTVAYLNDLDNMHKVVLEAKDESALVKLSEKLKEN-EI 81
            |:...:.:...|.|.:   .|:.|      |.:.|..:.|:     .||.||..|:   :.| |.
  Fly    22 PIAEAVMRDLVARAGLQGEWHVES------AGIEDWHSGHQ-----PDERALNVLA---RHNIEY 72

  Fly    82 KHKLWIEQPEN 92
            ..|..:..||:
  Fly    73 NGKARVLAPED 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14903NP_650561.1 PTH2_like 4..117 CDD:239107 18/76 (24%)
primo-2NP_001027188.1 LMWPTP 9..156 CDD:319971 18/76 (24%)

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