DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14891 and AFB5

DIOPT Version :10

Sequence 1:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_568718.1 Gene:AFB5 / 835062 AraportID:AT5G49980 Length:619 Species:Arabidopsis thaliana


Alignment Length:522 Identity:109/522 - (20%)
Similarity:167/522 - (31%) Gaps:223/522 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 WWKVLDYLSLNERLNFAASCERFQAIYELDSHRINHVLNMKDVCTLTHRVIK-RLMLLSGKHIHC 184
            ||:| :.|:.:|  .|..:|      |.|...|            ||.|..: |.::|.||    
plant    82 WWRV-EALTRSE--VFIGNC------YALSPAR------------LTQRFKRVRSLVLKGK---- 121

  Fly   185 VTGGP-------LHPNW-----PYLTEFVQLLGVSCPNLTELSFFKISVS---LAHMTHLFDGAN 234
                |       :.|:|     |:::...|    :.|.|.::...::.|:   ||.:...|.|..
plant   122 ----PRFADFNLMPPDWGANFAPWVSTMAQ----AYPCLEKVDLKRMFVTDDDLALLADSFPGFK 178

  Fly   235 GLINI-------TNISL--RRCNLKDAHIYCLQMLSKLKSLDIRENFSIKGDS------------ 278
            .||.:       :.||:  .:|.             |||.||:.|: .:..|.            
plant   179 ELILVCCEGFGTSGISIVANKCR-------------KLKVLDLIES-EVTDDEVDWISCFPEDVT 229

  Fly   279 -LKSL-------PISLEILNVSGCVDLSPKCLIQLAALSHLRELRCPGIVKFAKDNELYGRLAHY 335
             |:||       ||:.:.|  .|.|..||          .|::||   :.:|....||: ||...
plant   230 CLESLAFDCVEAPINFKAL--EGLVARSP----------FLKKLR---LNRFVSLVELH-RLLLG 278

  Fly   336 CPMLEVLELTDF---------------------MNVIQLGGLSRL-------------------- 359
            .|.|..|....|                     .:|:.|.|...|                    
plant   279 APQLTSLGTGSFSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNF 343

  Fly   360 -----------------HTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEIL------DSFGPMS 401
                             |.|.:..:  ||...:..|....|....||.|.|.      ||.||:|
plant   344 SYANISPDMFKPIILNCHKLQVFWA--LDSICDEGLQAVAATCKELRELRIFPFDPREDSEGPVS 406

  Fly   402 DTSFDLSIFSQLKELRTLILHNQNFTT-----------------LHLMGLQKLSTLEFLDLSGSP 449
            :.... :|....::|.:::...|..|.                 |.:||..:..     .::|.|
plant   407 ELGLQ-AISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPD-----HVTGKP 465

  Fly   450 N-------LSNEVVAKLTK-SLSGL----------------RRLKVDFCPLITRQLTKILEGNPK 490
            .       :.|  ..|||: ::|||                |.|.|.|.......|..:|||.|:
plant   466 MDEGFGAIVKN--CKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPR 528

  Fly   491 LQ 492
            ||
plant   529 LQ 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 6/28 (21%)
LRR <235..>463 CDD:443914 66/345 (19%)
leucine-rich repeat 239..262 CDD:275381 3/31 (10%)
leucine-rich repeat 263..285 CDD:275381 10/41 (24%)
leucine-rich repeat 286..338 CDD:275381 13/51 (25%)
leucine-rich repeat 339..387 CDD:275381 13/105 (12%)
leucine-rich repeat 388..415 CDD:275381 10/32 (31%)
leucine-rich repeat 416..439 CDD:275381 6/39 (15%)
leucine-rich repeat 440..465 CDD:275381 6/32 (19%)
AFB5NP_568718.1 F-box_5 51..92 CDD:436553 4/10 (40%)
Transp_inhibit 111..157 CDD:465867 11/57 (19%)
leucine-rich repeat 152..172 CDD:275381 4/19 (21%)
AMN1 <162..283 CDD:187754 36/150 (24%)
leucine-rich repeat 177..202 CDD:275381 5/37 (14%)
leucine-rich repeat 203..257 CDD:275381 16/66 (24%)
leucine-rich repeat 258..281 CDD:275381 8/26 (31%)
leucine-rich repeat 282..333 CDD:275381 7/50 (14%)
leucine-rich repeat 338..362 CDD:275381 0/23 (0%)
leucine-rich repeat 363..386 CDD:275381 5/24 (21%)
AMN1 <384..538 CDD:187754 36/155 (23%)
leucine-rich repeat 387..419 CDD:275381 10/32 (31%)
leucine-rich repeat 420..444 CDD:275381 3/23 (13%)
leucine-rich repeat 445..479 CDD:275381 6/40 (15%)
leucine-rich repeat 480..503 CDD:275381 5/22 (23%)
leucine-rich repeat 504..528 CDD:275381 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.

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