DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14891 and Ppa

DIOPT Version :10

Sequence 1:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster


Alignment Length:355 Identity:90/355 - (25%)
Similarity:147/355 - (41%) Gaps:72/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 HIHCVTGGPLHPNWPYLTEFVQLLGVSCPNLTELSFFKISV--------------SLAHMTHLFD 231
            |.|.:...|..|..|...|...:..: .|.|.|..|..:.|              ..|:...::.
  Fly   127 HHHHLPHRPASPESPPPVEGTHISNL-FPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWK 190

  Fly   232 GANGLINI--TNISLRRCNLKDAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPI---SLEILNV 291
            |....:::  ::.||..|.:|       :.:.|::.|.:|.       |||.|.:   :|..||:
  Fly   191 GVEAKLHLKRSSPSLFNCLVK-------RGIKKVQILSLRR-------SLKDLVLGVPALTSLNL 241

  Fly   292 SGCVDLSPKCL-----IQLAALSHLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNVI 351
            |||.:::...|     :.|..|..|....|..|.    |..| ||:|.:...||.|||....|:.
  Fly   242 SGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQIT----DTSL-GRIAQHLRNLETLELGGCCNIT 301

  Fly   352 QLG------GLSRLHTLVIHSSAQLDYHVNNVLLTSIA--------ESYSLRHLEILDSFGPMSD 402
            ..|      ||.:|..|.:.|.    :|:::..:..:|        .:..|.:|.:.|. ..:||
  Fly   302 NTGLLLIAWGLKKLKHLNLRSC----WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDC-QRLSD 361

  Fly   403 TSFDLSIFSQLKELRTLILHNQNF----TTLHLMGLQKLSTLEFLDLSGSPNLSNEVVAKLTKSL 463
            .:.. .|...|..|:::   |.:|    |...|..|.::..||.|:|....|:|:..:|.||:..
  Fly   362 EALG-HIAQGLTSLKSI---NLSFCVSVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGG 422

  Fly   464 SGLRRLKVDFCPLITRQ-LTKILEGNPKLQ 492
            ||:..|.|.||..|:.| ||.|.:|..:|:
  Fly   423 SGINSLDVSFCDKISDQALTHIAQGLYRLR 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 6/39 (15%)
LRR <235..>463 CDD:443914 64/255 (25%)
leucine-rich repeat 239..262 CDD:275381 4/24 (17%)
leucine-rich repeat 263..285 CDD:275381 6/24 (25%)
leucine-rich repeat 286..338 CDD:275381 17/56 (30%)
leucine-rich repeat 339..387 CDD:275381 14/61 (23%)
leucine-rich repeat 388..415 CDD:275381 7/26 (27%)
leucine-rich repeat 416..439 CDD:275381 6/26 (23%)
leucine-rich repeat 440..465 CDD:275381 9/24 (38%)
PpaNP_001261138.1 F-box_FBXL14 150..190 CDD:438897 6/40 (15%)
AMN1 <226..>334 CDD:187754 33/116 (28%)
leucine-rich repeat 236..256 CDD:275381 7/19 (37%)
leucine-rich repeat 263..288 CDD:275381 9/29 (31%)
leucine-rich repeat 289..314 CDD:275381 9/24 (38%)
leucine-rich repeat 315..347 CDD:275381 5/35 (14%)
AMN1 347..524 CDD:187754 35/111 (32%)
leucine-rich repeat 348..373 CDD:275381 7/26 (27%)
leucine-rich repeat 374..398 CDD:275381 6/26 (23%)
leucine-rich repeat 399..424 CDD:275381 9/24 (38%)
leucine-rich repeat 425..450 CDD:275381 10/24 (42%)
leucine-rich repeat 451..475 CDD:275381 1/2 (50%)
leucine-rich repeat 476..501 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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