DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14891 and Fbxl3

DIOPT Version :10

Sequence 1:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001094038.1 Gene:Fbxl3 / 306129 RGDID:1305660 Length:428 Species:Rattus norvegicus


Alignment Length:267 Identity:62/267 - (23%)
Similarity:108/267 - (40%) Gaps:53/267 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ITDDIWWKVLDYLSLNERLNFAASCERFQAIYEL-DSHR-INHVLNMKDVCTL--TH-RVIKRLM 175
            :..||...|..||.|.:|.:.:..|..:..::.: |..| ....||......|  || .:||:::
  Rat    39 LLQDIVLHVFKYLPLLDRAHASQVCRNWNQVFHMPDLWRCFEFELNQPATSYLKATHPELIKQII 103

  Fly   176 LLSGKHIHCVTGGPLHPNWPYLTEFVQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINIT 240
            .....|:..|:.        .:....:....:|..|::|    ::.||..:        |||:..
  Rat   104 KRHSNHLQYVSF--------KVDSSKESAEAACDILSQL----VNCSLKTL--------GLISTA 148

  Fly   241 NISLRRCNLKDAH-IYCLQML----SKLKSLDIRENFSIKGDSLKSLPI----SLEILNVSGCVD 296
            ..|.  .:|..:| |..|.::    ..|.||.| ::..:...|||.|..    :|::|.:|.|..
  Rat   149 RPSF--MDLPKSHFISALTVVFVNSKSLSSLKI-DDTPVDDPSLKVLVANNSDTLKLLKMSSCPH 210

  Fly   297 LSPKCLIQLAALSH-LRELR-----CPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNVIQLGG 355
            :||..::.:|...| ||||.     ....:..|..:|.:.||.|.  .::|        |.:..|
  Rat   211 VSPAGILCVADQCHGLRELALNYHLLSDELLLALSSEKHVRLEHL--RIDV--------VSENPG 265

  Fly   356 LSRLHTL 362
            .:..||:
  Rat   266 QTHFHTI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 5/25 (20%)
LRR <235..>463 CDD:443914 38/143 (27%)
leucine-rich repeat 239..262 CDD:275381 5/27 (19%)
leucine-rich repeat 263..285 CDD:275381 8/25 (32%)
leucine-rich repeat 286..338 CDD:275381 17/57 (30%)
leucine-rich repeat 339..387 CDD:275381 5/24 (21%)
leucine-rich repeat 388..415 CDD:275381
leucine-rich repeat 416..439 CDD:275381
leucine-rich repeat 440..465 CDD:275381
Fbxl3NP_001094038.1 F-box_FBXL3 34..76 CDD:438949 9/36 (25%)
FBXL3_LRR 79..428 CDD:467832 52/227 (23%)
leucine-rich repeat 174..199 CDD:275381 8/25 (32%)
leucine-rich repeat 200..225 CDD:275381 7/24 (29%)
leucine-rich repeat 252..286 CDD:275381 7/31 (23%)
leucine-rich repeat 287..333 CDD:275381
leucine-rich repeat 334..360 CDD:275381
leucine-rich repeat 361..383 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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