DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14891 and gadr-3

DIOPT Version :10

Sequence 1:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_498378.2 Gene:gadr-3 / 185933 WormBaseID:WBGene00018561 Length:710 Species:Caenorhabditis elegans


Alignment Length:417 Identity:92/417 - (22%)
Similarity:151/417 - (36%) Gaps:122/417 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LDYLSLNER----LNFAASCERFQAIYELDSHRINHVLNMKDVCTLTHRVIK---------RLML 176
            |||:....|    .|.....|..:||...::.|..|.|::|.....:.:..|         |.::
 Worm    93 LDYIGYYYRDLIDDNTIDIFELLKAILNNETRRNLHYLDIKGSHAFSKKWTKNIGTILPVLRSLI 157

  Fly   177 LSGKHIHCVTGGPLHPNWPYLTEFVQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINITN 241
            :.|:|:.              ::..|.|..|.||||.|...:.:|.      ...|.:.|.|:.:
 Worm   158 ICGRHLQ--------------SDDFQQLCESIPNLTYLDISETNVP------NISGISSLKNLES 202

  Fly   242 ISLRRCNLKDAHIYCLQM------LSKLKSLDI-----RENFSIKGDSLKSLPI--SLEILNVSG 293
            :.:|...|:     |.:.      |:.|:.||:     :.:..|....::|..:  .|..|..||
 Worm   203 LIMRSVELE-----CFEQFVDLFNLTGLRILDVSRSMYKHDTKIINQYVQSNKVLKELRFLECSG 262

  Fly   294 CVDLSPKCLIQL----------AALS-HLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELTDF 347
             .|::...|.|:          ||:: |:|.|                .|.|...:|....||..
 Worm   263 -TDINKNLLEQILNSHDNLQQVAAINCHIRSL----------------SLHHEVFLLNTATLTSS 310

  Fly   348 MNVIQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPMSDTSFDLS---- 408
            :.       |..|.|.:|..:.::..:.|:|           ||  ...:.|..|..||.|    
 Worm   311 LK-------SLTHYLGVHRISSVERVLENML-----------HL--FPKYDPDLDNRFDFSECVK 355

  Fly   409 --IFSQLKELRTLILHNQNFTTLHLMGLQKLSTLEF--LDLSGSPNLSNEVVAKLTKSLSGLRRL 469
              |.|.||...:|.:  |.:.||.|..:.:.....|  .||       .::|.||...:....||
 Worm   356 IIINSALKIESSLGI--QGYGTLCLWHIARNQDARFQPFDL-------YQLVCKLLDGVYNNGRL 411

  Fly   470 KV---DFCPLITR---QLTKILEGNPK 490
            .:   ||...:.|   .|.|:||.:.|
 Worm   412 FIATKDFNISLWRTIESLLKLLESSLK 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 5/25 (20%)
LRR <235..>463 CDD:443914 56/259 (22%)
leucine-rich repeat 239..262 CDD:275381 4/28 (14%)
leucine-rich repeat 263..285 CDD:275381 5/28 (18%)
leucine-rich repeat 286..338 CDD:275381 14/62 (23%)
leucine-rich repeat 339..387 CDD:275381 9/47 (19%)
leucine-rich repeat 388..415 CDD:275381 10/32 (31%)
leucine-rich repeat 416..439 CDD:275381 5/22 (23%)
leucine-rich repeat 440..465 CDD:275381 6/26 (23%)
gadr-3NP_498378.2 PPP1R42 <176..>231 CDD:455733 16/65 (25%)
Blue background indicates that the domain is not in the aligned region.

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