| Sequence 1: | NP_650560.1 | Gene: | CG14891 / 42013 | FlyBaseID: | FBgn0038445 | Length: | 495 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001040928.2 | Gene: | C48D1.1 / 178271 | WormBaseID: | WBGene00008177 | Length: | 632 | Species: | Caenorhabditis elegans |
| Alignment Length: | 280 | Identity: | 58/280 - (20%) |
|---|---|---|---|
| Similarity: | 122/280 - (43%) | Gaps: | 80/280 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 237 INITNIS-------------LRRCNLKDAHI--------YCLQMLSKLKSLDI-RENFSIKGDSL 279
Fly 280 KSLPISLEILNVSGCVDL----SPKCLIQLAALSHLRELRCPGIVKFAKDN--ELYGRLAHYCPM 338
Fly 339 LEVLELTDFMNVIQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPMSDT 403
Fly 404 SFDLSIFSQLKELRTLILHNQN-----FTTLHLMGLQKLSTLEFLDLSGSPNLSNEVVAKLTKSL 463
Fly 464 SGLRRLKVDFCPLITRQLTK 483 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG14891 | NP_650560.1 | RRM | 41..92 | CDD:214636 | |
| leucine-rich repeat | 211..237 | CDD:275381 | 58/280 (21%) | ||
| LRR | <235..>463 | CDD:443914 | 54/258 (21%) | ||
| leucine-rich repeat | 239..262 | CDD:275381 | 6/43 (14%) | ||
| leucine-rich repeat | 263..285 | CDD:275381 | 3/22 (14%) | ||
| leucine-rich repeat | 286..338 | CDD:275381 | 12/57 (21%) | ||
| leucine-rich repeat | 339..387 | CDD:275381 | 11/47 (23%) | ||
| leucine-rich repeat | 388..415 | CDD:275381 | 8/26 (31%) | ||
| leucine-rich repeat | 416..439 | CDD:275381 | 6/27 (22%) | ||
| leucine-rich repeat | 440..465 | CDD:275381 | 7/24 (29%) | ||
| C48D1.1 | NP_001040928.2 | LRR | <122..303 | CDD:443914 | 48/214 (22%) |
| leucine-rich repeat | 124..149 | CDD:275380 | 5/24 (21%) | ||
| leucine-rich repeat | 150..174 | CDD:275380 | 7/27 (26%) | ||
| leucine-rich repeat | 175..196 | CDD:275380 | 7/21 (33%) | ||
| leucine-rich repeat | 197..221 | CDD:275380 | 5/27 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||