DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14891 and fbxl20

DIOPT Version :10

Sequence 1:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_002664757.2 Gene:fbxl20 / 100331130 ZFINID:ZDB-GENE-081031-27 Length:436 Species:Danio rerio


Alignment Length:345 Identity:89/345 - (25%)
Similarity:136/345 - (39%) Gaps:92/345 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 LTEFVQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINITNISLRRCNLKDAHIYCLQMLS 261
            |..|.|    :|.|:..||.                 ||...||:.:   ||  ....:|    .
Zfish   109 LRTFAQ----NCRNIELLSL-----------------NGCTKITDST---CN--SLSKFC----P 143

  Fly   262 KLKSLDIRENFSIKGDSLKSL----PISLEILNVSGCVDLSPKCLIQLAALSHLRELRCPGIV-K 321
            |||.||:....||...|||:|    |: ||.||:|.| |...|..||  ||...    |||:. .
Zfish   144 KLKHLDLASCTSITNLSLKALSEGCPL-LEQLNISWC-DQVTKDGIQ--ALVRC----CPGLKGL 200

  Fly   322 FAK-----DNELYGRLAHYCPMLEVLELTDFMNVIQLG------GLSRLHTLVIHSSAQLDYHVN 375
            |.|     ::|....:..:||.|..|.|.....:...|      |..||.:|.:...|    ::.
Zfish   201 FLKGCTQLEDEALKHIGGHCPELVTLNLQTCSQITDEGLITICRGCHRLQSLCVSGCA----NIT 261

  Fly   376 NVLLTSIAESY-SLRHLEILDSFGPMSDTSF-------------DLSIFSQLKE--LRTLILHNQ 424
            :.:|.::.::. .||.||:. ....::|..|             ||....|:.:  |..|.:|..
Zfish   262 DAILNALGQNCPRLRILEVA-RCSQLTDVGFTSLARNCHELEKMDLEECVQITDATLIQLSIHCP 325

  Fly   425 NFTTLHLM--------GLQKLST-------LEFLDLSGSPNLSNEVVAKLTKSLSGLRRLKVDFC 474
            ....|.|.        |:::|.:       ||.::|...|.:::..:..| ||...|.|:::..|
Zfish   326 RLQVLSLSHCELITDDGIRQLGSGPCAHDRLEVIELDNCPLITDASLEHL-KSCHSLDRIELYDC 389

  Fly   475 PLITRQLTKILEGN-PKLQV 493
            ..|||...|.|..: |.::|
Zfish   390 QQITRAGIKRLRTHLPNIKV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 4/25 (16%)
LRR <235..>463 CDD:443914 70/274 (26%)
leucine-rich repeat 239..262 CDD:275381 5/22 (23%)
leucine-rich repeat 263..285 CDD:275381 11/25 (44%)
leucine-rich repeat 286..338 CDD:275381 19/57 (33%)
leucine-rich repeat 339..387 CDD:275381 10/54 (19%)
leucine-rich repeat 388..415 CDD:275381 9/39 (23%)
leucine-rich repeat 416..439 CDD:275381 7/30 (23%)
leucine-rich repeat 440..465 CDD:275381 7/24 (29%)
fbxl20XP_002664757.2 F-box_FBXL2-like 22..66 CDD:438887
leucine-rich repeat 65..92 CDD:275381
AMN1 93..289 CDD:187754 60/222 (27%)
leucine-rich repeat 93..112 CDD:275381 1/2 (50%)
leucine-rich repeat 119..132 CDD:275381 5/29 (17%)
leucine-rich repeat 145..170 CDD:275381 10/24 (42%)
leucine-rich repeat 171..196 CDD:275381 13/31 (42%)
leucine-rich repeat 197..222 CDD:275381 4/24 (17%)
AMN1 206..394 CDD:187754 40/193 (21%)
leucine-rich repeat 223..248 CDD:275381 5/24 (21%)
leucine-rich repeat 249..274 CDD:275381 4/28 (14%)
leucine-rich repeat 275..300 CDD:275381 6/25 (24%)
leucine-rich repeat 301..326 CDD:275381 6/24 (25%)
leucine-rich repeat 327..349 CDD:275381 4/21 (19%)
leucine-rich repeat 356..380 CDD:275381 7/24 (29%)
leucine-rich repeat 381..406 CDD:275381 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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