DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14891 and si:ch211-214j8.12

DIOPT Version :10

Sequence 1:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001091661.1 Gene:si:ch211-214j8.12 / 100000539 ZFINID:ZDB-GENE-060526-102 Length:627 Species:Danio rerio


Alignment Length:242 Identity:56/242 - (23%)
Similarity:88/242 - (36%) Gaps:83/242 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 LQMLSKLKSLDIRENFSIKGDSLKSL----PISLEILNVSGCVDLSPKCLIQLAALSH-LRELRC 316
            |.:|.:|.||.:....|:...||.||    ..:|:.|::||..::|...|.:|....| ||.|..
Zfish    97 LLLLPQLSSLSLASACSLVNASLCSLIQIRCQNLQSLDLSGSQNISASVLCELLGSQHRLRSLSL 161

  Fly   317 PGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNVIQLGGLSRLHTLVIHSSAQLDYHVNNVLLTS 381
            .|.:   .|.::...|:..||.|:.|:::..:::...|.|         ..|..:.|||:.    
Zfish   162 AGTL---CDQKVMSVLSLQCPKLKHLDVSRCLHLTPAGLL---------PLAYREAHVNST---- 210

  Fly   382 IAESYSLRHLEILDSFGPMSDTSFDLSIFSQLKELRTLILHNQNFTTLHLMGLQKLSTLEFLDLS 446
                                                                 ..:|:|..||:.
Zfish   211 -----------------------------------------------------NTISSLLALDIG 222

  Fly   447 GSPNLSNEV--VAKLTKSLSGLRRLKVD----FCPLITRQLTKILEG 487
            .:.|..:.|  ||.|..||.||:||.|:    .|.||   |.:..||
Zfish   223 LAENEGDAVSAVAFLLLSLPGLQRLAVEGLGQACVLI---LNREFEG 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381
LRR <235..>463 CDD:443914 43/212 (20%)
leucine-rich repeat 239..262 CDD:275381 2/4 (50%)
leucine-rich repeat 263..285 CDD:275381 8/25 (32%)
leucine-rich repeat 286..338 CDD:275381 15/52 (29%)
leucine-rich repeat 339..387 CDD:275381 8/47 (17%)
leucine-rich repeat 388..415 CDD:275381 0/26 (0%)
leucine-rich repeat 416..439 CDD:275381 0/22 (0%)
leucine-rich repeat 440..465 CDD:275381 10/26 (38%)
si:ch211-214j8.12NP_001091661.1 AMN1 122..>201 CDD:187754 21/90 (23%)
leucine-rich repeat 130..155 CDD:275381 7/24 (29%)
leucine-rich repeat 156..180 CDD:275381 7/26 (27%)
leucine-rich repeat 181..215 CDD:275381 8/99 (8%)
leucine-rich repeat 216..243 CDD:275381 10/26 (38%)
leucine-rich repeat 314..368 CDD:275381
leucine-rich repeat 403..427 CDD:275381
leucine-rich repeat 428..453 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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