DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and Casp8

DIOPT Version :10

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_071613.1 Gene:Casp8 / 64044 RGDID:620945 Length:482 Species:Rattus norvegicus


Alignment Length:322 Identity:95/322 - (29%)
Similarity:149/322 - (46%) Gaps:46/322 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLFGQKNKHKKDKADATKIA----HTPTSELDLKRIII-----------SRPTNED-TYENCAR- 54
            ||.|:.:.:::...:.....    ..|.|.||...|.:           |...|.| .|:..:: 
  Rat   170 SLLGRIDDYERSSTERRMSTEGGEELPVSVLDEVTIKMQDMWDSPGEQESESLNSDNVYQMKSKP 234

  Fly    55 AGIALILNHKD----------VKGQKQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLK 109
            .|..||.|:.:          :...:.|.||..|.:.:..|.:...|::.:|.|.|.|:|::.|.
  Rat   235 RGYCLIFNNNNFSKAREDIPKLSNMRDRKGTNYDEEALSKTFKELHFEIVSFSDCTASQIHEVLV 299

  Fly   110 EVAREDHSQNDCFVLAVMSHGTEGKVYAKD-MSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRG 173
            ....:||...|||:..::|||.:|.||..| ....:..|.:.|.|..|.:|..|||:||||||:|
  Rat   300 SYQSKDHKGKDCFICCILSHGDKGIVYGTDGKEASIYELTSYFTGSKCPSLAGKPKIFFIQACQG 364

  Fly   174 ANLEKAVEFSSFAVMTRELVPEPAAAVQPITYA--IPSTADILVFYSTFDKFFSFRNVDDGSWFI 236
            .|.:|||.......:.:|.|.|..::    :|.  ||..||.|:..:|.....|:|:...|:|:|
  Rat   365 NNFQKAVPVPDETGLEQEHVLEEDSS----SYKNYIPDEADFLLGMATVKNCVSYRDPTRGTWYI 425

  Fly   237 QSLCRVLDQAAANEAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTK 298
            ||||:.|.:..      |.|.::|.:||.||      |..:.|:...|..|:||..:.||.|
  Rat   426 QSLCQSLRERC------PRGEDILSILTGVN------YDVSNKDNPRNMGKQMPQPIFTLRK 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 83/259 (32%)
Casp8NP_071613.1 DED_Caspase_8_r1 3..84 CDD:260041
DD 98..179 CDD:472698 3/8 (38%)
CASc 227..480 CDD:237997 84/265 (32%)
Blue background indicates that the domain is not in the aligned region.

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