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Protein Alignment Decay and caspa

DIOPT Version :9

Sequence 1:	NP_477462.1	Gene:	Decay / 42008	FlyBaseID:	FBgn0028381	Length:	308	Species:	Drosophila melanogaster
Sequence 2:	NP_571580.1	Gene:	caspa / 57933	ZFINID:	ZDB-GENE-000616-3	Length:	383	Species:	Danio rerio

Alignment Length:	301	Identity:	75/301 - (24%)
Similarity:	139/301 - (46%)	Gaps:	41/301 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 KDKADATKIAHTPTSELDLKRIIISRPTNEDTYE---NCARAGIALILNHKDV--KGQKQRVGTE 76
            ||.|...::..||.|:....:|:  |...::|||   ...|..:||::|:.|.  |..| |.|:|
Zfish   105 KDPAQLKELKVTPCSQQFKNKIL--REKGQETYEIKDKSVRKRLALLINNVDFDDKAMK-RSGSE 166

  Fly    77 RDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVA-REDHSQNDCFVLAVMSHGTEGKVYA--- 137
            :|.::||..|:...:.|....:|:..|:::.:::.| ||:|..:|...:.:||||....:..
Zfish   167 KDEENMEKLLKELDYQVVKRPNLSAKEMDEAIRDFAQREEHKYSDSAFVVIMSHGKRDAIMGVHY 231

  Fly   138 -----KDMSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRELVPEPA 197
                 ...|:||:.::.....:||..|::|||:..||||||....:        |...:..|:..
Zfish   232 HRTNNPSDSFPVDNVYRRLNSENCPALRDKPKVILIQACRGGEHGR--------VWASDGEPDEP 288

  Fly   198 AAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAANEAATPEGVELLRL 262
            ..::...: :....|.:...|......|:|:|.:|::::|:|..|..:.|..:       .:..|
Zfish   289 IEIEDDDF-VHKEKDFISLMSCTPDTKSYRHVQNGTFYVQTLVDVFIKCAHED-------HIEEL 345

  Fly   263 LTAVNRKVAYEYQSNTKNEALNQMKEMP-NFMSTLTKTFQL 302
            ...|.|:  :|:.:     .:...|:|. ...:||.|.|.|
Zfish   346 FRKVLRR--FEHPN-----MIGNFKQMACKDRATLPKLFYL 379

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.