DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and caspbl

DIOPT Version :9

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001139064.1 Gene:caspbl / 566185 ZFINID:ZDB-GENE-090311-53 Length:409 Species:Danio rerio


Alignment Length:320 Identity:86/320 - (26%)
Similarity:128/320 - (40%) Gaps:78/320 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDTDFSL-FGQKNKHKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYENCARAGIALIL-NHK 64
            ||...|: |.::|         |...:||.|...                   |.|:||:: |..
Zfish   145 DDASISIHFYKQN---------TLSIYTPVSRTQ-------------------RKGLALLITNIL 181

  Fly    65 DVKGQKQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVA-REDHSQNDCFVLAVMS 128
            ....|..|.|.|||.::||..|:...|.|..:.:||.:||:..:::.: |.:|...|...:.:||
Zfish   182 FANKQDDRAGAERDEENMEWLLKNLNFMVIKYRNLTGNEISRAVQDFSRRHEHQDADSTFVVIMS 246

  Fly   129 HGTEGKVYAKDMSYPVERLWNP------FLGD--------NCKTLKNKPKLFFIQACRGANLEKA 179
            ||  .::..||....|...|..      |:.|        ||..|.:|||:..||||||..|.  
Zfish   247 HG--DRIQNKDAILGVNYNWLQNRNDVYFVEDTFSHLNSVNCPALIDKPKVILIQACRGGQLG-- 307

  Fly   180 VEFSSFAVMTRELVPEPAAAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLD 244
                  .|..::.|||..:.|.       ...|.:.|.||.....::|:...||:||..:..|..
Zfish   308 ------GVPVKDCVPESDSWVH-------KEKDFVCFMSTMPDVVAYRDEVKGSYFISYIVDVFC 359

  Fly   245 QAAANEAATPEGVELLRLLTAVNRKVAYEYQSNTKNEAL-NQMKEMPNFMST-LTKTFQL 302
            .:|..:       .::.|.    ||||...:   |:|.. .|.|.:|....| |.|.|.|
Zfish   360 SSACKD-------HIMELF----RKVAARME---KDERFRRQAKLLPCIERTSLVKKFYL 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 76/265 (29%)
caspblNP_001139064.1 Pyrin_ASC-like 5..84 CDD:260033
CASc 167..406 CDD:237997 77/289 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587237
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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