DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and casp10

DIOPT Version :9

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_685430.4 Gene:casp10 / 557302 ZFINID:ZDB-GENE-070608-2 Length:520 Species:Danio rerio


Alignment Length:353 Identity:98/353 - (27%)
Similarity:154/353 - (43%) Gaps:78/353 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FSLFGQK-NKHKKDKADA----------TKIAHTPTSELDLKRI-IISRPTNEDTY-ENCA---- 53
            :...|:| |::|::..:.          :.||..|:::..|..: :|.|..:|.|. ||.:    
Zfish   178 YPALGRKINQYKEENLNGVFIAQETEGISSIADLPSAQTSLSSVEMIDREMDEITLNENASGFSG 242

  Fly    54 ------------------------------------RAGIALILNHKDVK--GQKQRVGTERDRD 80
                                                |.|:.||:|:.|..  |...|.||:.|.|
Zfish   243 DNSQHSDSVNSGIISESSEMPQIENSMVEQYEMKGERRGVCLIINNYDFSACGWLNREGTDIDHD 307

  Fly    81 DMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAVMSHGTEGKVYAKD-MSYPV 144
            .:....:..||::.|..|.|..:|...|.:::.:||:|.||.|..::|||....:...| .:.|.
Zfish   308 SLRDVFEWLGFEILTRRDCTGDQILQALMDLSTQDHTQADCVVCCILSHGRLNDIIGVDGKAVPF 372

  Fly   145 ERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRELVPEPAAAVQPITYAIPS 209
            :.|........|.:|..||||||||||||...::|| |........:::...|...:.   :||.
Zfish   373 KELMETLSPFRCSSLYQKPKLFFIQACRGTQNQRAV-FPQTFTEDEDVLASDAGVPRD---SIPE 433

  Fly   210 TADILVFYSTFDKFFSFRNVDDGSWFIQSLC---RVLDQAAANEAATPEGVELLRLLTAVNRKVA 271
            .||.|:..||...:.|:|:...|:|||||||   |:|         .|.|.:||.:||.||..| 
Zfish   434 MADYLMAMSTVPWYASYRDKSKGTWFIQSLCDNLRLL---------VPRGNDLLSILTKVNADV- 488

  Fly   272 YEYQSNTKNEALNQMKEMPNFMSTLTKT 299
                 :.|::.....|:||....:||:|
Zfish   489 -----SKKSDKSGLKKQMPQPEFSLTRT 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 84/252 (33%)
casp10XP_685430.4 DED_Caspase_8_10_r1 11..87 CDD:260059
DED_Caspase_8_10_r2 108..190 CDD:260042 3/11 (27%)
DUF4603 <200..>256 CDD:292020 10/55 (18%)
CASc 273..515 CDD:237997 84/258 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.770

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