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Protein Alignment Decay and csp-3
DIOPT Version :9
Sequence 1: | NP_477462.1 |
Gene: | Decay / 42008 |
FlyBaseID: | FBgn0028381 |
Length: | 308 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_493011.2 |
Gene: | csp-3 / 190006 |
WormBaseID: | WBGene00000821 |
Length: | 139 |
Species: | Caenorhabditis elegans |
Alignment Length: | 126 |
Identity: | 37/126 - (29%) |
Similarity: | 61/126 - (48%) |
Gaps: | 13/126 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 176 LEKAVEFSSFAVMTRELVPEPAAAVQ---PITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQ 237
|::||....|.....:.:|:....:: |......|.||:||.:||...|.||::....:|:||
Worm 13 LQRAVRCDGFIDNFFDRIPKFFQFMKSKFPSHQTSSSQADLLVSFSTSPGFLSFKDETKDTWYIQ 77
Fly 238 SLCRVLDQAAANEAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTK 298
.|.||:.:.| :...|..|||..||:|..:|:: ::.:...|:.|.|.|..||
Worm 78 ELYRVIIENA-------KDTHLADLLTETNRRVVEKYEA---DKVVFVCKQAPEFWSRFTK 128
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Decay | NP_477462.1 |
CASc |
54..302 |
CDD:237997 |
37/126 (29%) |
csp-3 | NP_493011.2 |
CASc |
<11..132 |
CDD:320727 |
37/126 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160162609 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3573 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000242 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.740 |
|
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