DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and LOC1279251

DIOPT Version :10

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_318945.4 Gene:LOC1279251 / 1279251 VectorBaseID:AGAMI1_001927 Length:295 Species:Anopheles gambiae


Alignment Length:310 Identity:99/310 - (31%)
Similarity:153/310 - (49%) Gaps:37/310 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLFGQKNKHKKDKADATKIAH-TPTSELDLKRIIISRPTNE-DTYE-----NCARAGIALILNHK 64
            ::|.:|   ::|.:|...:.| :|.:........|.||... :.|.     |..|.|:|||.:|.
Mosquito    10 AMFSRK---QEDSSDTRGMPHGSPIASGSQTANGIIRPAYVIERYAAYYPMNHKRRGMALIFSHN 71

  Fly    65 DVKGQK----QRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLA 125
            ....:.    .|.|:..|...::.||:.|.|||:.:.|....||...:.:|:..|||.:|||::|
Mosquito    72 KYNVRNVSLPVREGSAIDCKRLKETLELFRFDVKVYPDFKLEEIKSVIGKVSSMDHSDSDCFLVA 136

  Fly   126 VMSHGTEGK-VYAKDMSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMT 189
            :::||.:|. |||.|..|.:..:|:.|..|||.:|..:||:|.||||||..|:..|:.....|  
Mosquito   137 ILTHGEDGGIVYAYDQPYELSLIWSFFTADNCPSLAGRPKIFVIQACRGNQLDHGVKVQKDGV-- 199

  Fly   190 RELVPEPAAAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAANEAATP 254
                         ..|:||:.||.|..|:|...|.:|||..:|||||..||:.|.:       ..
Mosquito   200 -------------ARYSIPTHADFLFAYATIPGFMAFRNTTEGSWFINELCKELQE-------NG 244

  Fly   255 EGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTFQLRV 304
            ...::..|||.|.:||||:::|.:.....|..|:.|..:|.||:.....|
Mosquito   245 HRYDINTLLTFVTQKVAYDHESVSNMPEYNMRKQTPCVVSMLTRLLLFNV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 87/252 (35%)
LOC1279251XP_318945.4 None

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