DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and Dronc

DIOPT Version :10

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_318061.4 Gene:Dronc / 1278470 VectorBaseID:AGAMI1_004991 Length:430 Species:Anopheles gambiae


Alignment Length:254 Identity:76/254 - (29%)
Similarity:123/254 - (48%) Gaps:32/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GIALILNHKDV--KGQKQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQ 118
            |:|.|:|....  |....|.|.:.|..::.:..|..||.|..::|:|..::.:.|.::...:|..
Mosquito   183 GVAFIVNVITFLKKVHPTRNGADIDGRNLISVFQQLGFVVFYYEDITMGDLKELLAQLKESEHLS 247

  Fly   119 NDCFVLAVMSHGTEGK----VYAKDMS-YPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEK 178
            .|||...::|||...|    ::..|.| ..||.|...|...|||.|.:|||||||..|||..   
Mosquito   248 CDCFAFYILSHGDHRKGSDYIFLHDNSLLRVEDLLTEFNSVNCKRLVHKPKLFFISICRGVQ--- 309

  Fly   179 AVEFSSFAVMT---RELVPEPAAAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLC 240
             .:..::.:.|   |:.:.:|.   :|:...|.:..|:||.|:|...|.:.|:.:.||||::|:|
Mosquito   310 -SDLGAYRLSTNTERDGMIDPG---KPLPSNIATYCDMLVCYATVPGFAAHRDTNTGSWFVESMC 370

  Fly   241 RVLDQAAANEAATPEGVELLRLLTAVNRKVAYEYQSN--TKNEALNQM-KEMPNFMSTL 296
            ::.     :|.|....||:|       .|:..||.|:  |::.||..: .|...|...|
Mosquito   371 KIW-----SEHAHDTDVEIL-------MKLVGEYASSYRTEHSALQTICTEQRGFFKQL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 76/254 (30%)
DroncXP_318061.4 CARD 9..78 CDD:260018
CASc 174..388 CDD:444667 66/223 (30%)
Blue background indicates that the domain is not in the aligned region.

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