DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and Casp6

DIOPT Version :10

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_033941.3 Gene:Casp6 / 12368 MGIID:1312921 Length:276 Species:Mus musculus


Alignment Length:317 Identity:98/317 - (30%)
Similarity:141/317 - (44%) Gaps:54/317 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDTDFSLFG-QKNKHKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYENCARAGIALILNHK 64
            |.:||    | .|::...|.|:..|:.|                         .|.|:|||.||:
Mouse     1 MTETD----GFYKSREVFDPAEQYKMDH-------------------------KRRGVALIFNHE 36

  Fly    65 DVKGQ---KQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAV 126
            .....   .:|.||..|||::.......||:|:.|:||...|:...:.||:...|...|||:...
Mouse    37 RFFWHLTLPERRGTNADRDNLTRRFSDLGFEVKCFNDLRAEELLLKIHEVSTSSHIDADCFICVF 101

  Fly   127 MSHGTEGKVYAKDMSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRE 191
            :|||....|||.|....::.|...|.||.|::|..|||:|.||||||:.       ....|:..:
Mouse   102 LSHGEGNHVYAYDAKIEIQTLTGLFKGDKCQSLVGKPKIFIIQACRGSQ-------HDVPVVPLD 159

  Fly   192 LVPEPAAAVQPIT-------YAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAAN 249
            :|......:..:|       |.:|:.||.|:.||..:.::|.|...:|||:||.||.:|      
Mouse   160 MVDHQTDKLDNVTQVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEML------ 218

  Fly   250 EAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTFQLRVKP 306
             |.....:|...|||.|||||:.......|:......|::|.|.|.|||......||
Mouse   219 -ARYGSSLEFTELLTLVNRKVSQRRVDFCKDPDAIGKKQVPCFASMLTKKLHFCPKP 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 87/257 (34%)
Casp6NP_033941.3 CASc 20..272 CDD:214521 89/290 (31%)
Tri-arginine exosite. /evidence=ECO:0000250|UniProtKB:P55212 25..27 0/1 (0%)
130's region. /evidence=ECO:0000250|UniProtKB:P55212 108..125 5/16 (31%)

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