DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and Casp6

DIOPT Version :9

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_033941.3 Gene:Casp6 / 12368 MGIID:1312921 Length:276 Species:Mus musculus


Alignment Length:317 Identity:98/317 - (30%)
Similarity:141/317 - (44%) Gaps:54/317 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDTDFSLFG-QKNKHKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYENCARAGIALILNHK 64
            |.:||    | .|::...|.|:..|:.|                         .|.|:|||.||:
Mouse     1 MTETD----GFYKSREVFDPAEQYKMDH-------------------------KRRGVALIFNHE 36

  Fly    65 DVKGQ---KQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAV 126
            .....   .:|.||..|||::.......||:|:.|:||...|:...:.||:...|...|||:...
Mouse    37 RFFWHLTLPERRGTNADRDNLTRRFSDLGFEVKCFNDLRAEELLLKIHEVSTSSHIDADCFICVF 101

  Fly   127 MSHGTEGKVYAKDMSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRE 191
            :|||....|||.|....::.|...|.||.|::|..|||:|.||||||:.       ....|:..:
Mouse   102 LSHGEGNHVYAYDAKIEIQTLTGLFKGDKCQSLVGKPKIFIIQACRGSQ-------HDVPVVPLD 159

  Fly   192 LVPEPAAAVQPIT-------YAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAAN 249
            :|......:..:|       |.:|:.||.|:.||..:.::|.|...:|||:||.||.:|      
Mouse   160 MVDHQTDKLDNVTQVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEML------ 218

  Fly   250 EAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTFQLRVKP 306
             |.....:|...|||.|||||:.......|:......|::|.|.|.|||......||
Mouse   219 -ARYGSSLEFTELLTLVNRKVSQRRVDFCKDPDAIGKKQVPCFASMLTKKLHFCPKP 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 87/257 (34%)
Casp6NP_033941.3 CASc 20..272 CDD:214521 89/290 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842778
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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