DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and casp3.1

DIOPT Version :9

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_031751294.1 Gene:casp3.1 / 100486222 XenbaseID:XB-GENE-5779643 Length:287 Species:Xenopus tropicalis


Alignment Length:290 Identity:106/290 - (36%)
Similarity:152/290 - (52%) Gaps:40/290 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 HKKDKADATKIAHTPTSELDLKRIIISRPTNEDTYE-NCARAGIALIL----NHKDVKGQKQRVG 74
            |..|:|::.|:..||           ::|.|...|: |..:..|.|||    ...|.||::.| .
 Frog    21 HSLDRAESLKMNVTP-----------AKPDNSMVYKMNYKQKSICLILCMEKFDNDPKGKRSR-N 73

  Fly    75 TERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAVMSHGTEGKVYAKD 139
            :..|:..:.......||:||..::.|..||...|.::||:|||:..|||..|:|||.:...||:|
 Frog    74 SNDDKIFLNNIFVKMGFEVRLEENKTADEIESLLNDIARQDHSERGCFVCVVISHGDKDFFYARD 138

  Fly   140 MSYPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEK-AVEFSSFAVMTRELVPEPAAAVQPI 203
            ..:.::.|..||.|:|||:|..||||||||||||...:. .|:.:..|..|..:           
 Frog   139 QEFKIDALAEPFHGENCKSLIGKPKLFFIQACRGDKTDSGVVKDAGIATTTASV----------- 192

  Fly   204 TYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAANEAATPEGVELLRLLTAVNR 268
               ||:..|.|..|:|...:|::|. ..|||||||||.:|.:.....       :||::||.||.
 Frog   193 ---IPTECDFLFAYATPPGYFAWRR-GAGSWFIQSLCEMLGEYWQKR-------DLLQILTRVNH 246

  Fly   269 KVAYEYQSNTKNEALNQMKEMPNFMSTLTK 298
            ||||||.||:.:...|:.|||..|:|.|||
 Frog   247 KVAYEYISNSTDTDKNEKKEMTCFLSMLTK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 96/250 (38%)
casp3.1XP_031751294.1 CASc 43..281 CDD:237997 98/257 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D417543at33208
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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