DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and casp20

DIOPT Version :10

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001129724.2 Gene:casp20 / 100192215 ZFINID:ZDB-GENE-081022-114 Length:347 Species:Danio rerio


Alignment Length:236 Identity:86/236 - (36%)
Similarity:121/236 - (51%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GIALILNHKDVKGQKQRVGTERDRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQND 120
            ||.:|:|:.|.....:|.|::.|::.:....:..||:|....:.|.:|:.:.|:.:.|.  ...|
Zfish   114 GICVIINNVDFTSMGERRGSDEDQNYLAKVFRWLGFEVVAHRNKTAAEMKNILQALGRT--VDGD 176

  Fly   121 CFVLAVMSHGTEGKVYAKDMS-YPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSS 184
            |||..|:|||.|..|...|.| ..|:.:.|||.|.||:.|..||||||||||||...:..|...:
Zfish   177 CFVCCVLSHGVEEGVCGTDGSLVSVDEIRNPFTGVNCQKLVGKPKLFFIQACRGQRKQLRVNAQA 241

  Fly   185 FAVMTRELVPEPAAAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAAN 249
            ......|...|.......||  |||..|.|:..||.|...|:|..|:||||||||||.|      
Zfish   242 DGPGDGESEMEVDGDDFDIT--IPSDTDFLIARSTTDGHVSYRKPDEGSWFIQSLCRNL------ 298

  Fly   250 EAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMP 290
            |...|.|.::|.:|.:||.:|:.        :.|:. |:||
Zfish   299 EKHCPLGADILTILLSVNNEVSI--------QGLHS-KQMP 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 86/236 (36%)
casp20NP_001129724.2 CARD 10..82 CDD:260018
CASc 106..343 CDD:237997 86/236 (36%)
Blue background indicates that the domain is not in the aligned region.

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