DRSC/TRiP Functional Genomics Resources

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Protein Alignment Decay and casp3.2

DIOPT Version :9

Sequence 1:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001120900.1 Gene:casp3.2 / 100151728 XenbaseID:XB-GENE-479960 Length:288 Species:Xenopus tropicalis


Alignment Length:287 Identity:101/287 - (35%)
Similarity:148/287 - (51%) Gaps:39/287 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KDKADATKIAHTPTSELDLKRIIISRPTNEDTYENCARAGIALILNHKDVKGQKQ---RVGTERD 78
            ||....||.||......|...:                 ||.||:|:|:.:....   |.||:.|
 Frog    34 KDMEKKTKFAHLHKYRTDYPEM-----------------GICLIINNKNFQSSTNMGVRNGTDVD 81

  Fly    79 RDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAVMSHGTEGKVYAKDMSYP 143
            ...:..|..|.|:.|:..:|...::|...||:::.||||:...||.|::|||.:|.||..|....
 Frog    82 ARKLHETFTGLGYKVKVCNDQKSNDIFTLLKKMSEEDHSKRSSFVCAILSHGEDGLVYGVDGPIQ 146

  Fly   144 VERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVMTRELVPEPAAAVQPITYAIP 208
            ::.|.:.|.||.||||..||||||||||||.:|:..:|..|.:.:..|:            ..||
 Frog   147 IKNLTDLFRGDRCKTLVGKPKLFFIQACRGTDLDSGIETDSGSELGEEI------------QRIP 199

  Fly   209 STADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAANEAATPEGVELLRLLTAVNRKVAYE 273
            ..||.|..|||...::|:||..:|||||||||.::.....:       :||:::||.||..||.|
 Frog   200 VEADFLYAYSTVPGYYSWRNTMNGSWFIQSLCEMIKLYGPH-------LELIQILTCVNHMVALE 257

  Fly   274 YQSNTKNEALNQMKEMPNFMSTLTKTF 300
            ::|.:..:|.:..|::|..:|.|||.|
 Frog   258 FESCSTQQAFHAKKQIPCVVSMLTKAF 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DecayNP_477462.1 CASc 54..302 CDD:237997 94/250 (38%)
casp3.2NP_001120900.1 CASc 48..286 CDD:237997 95/273 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D417543at33208
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10454
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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