Sequence 1: | NP_650554.3 | Gene: | Cad89D / 42006 | FlyBaseID: | FBgn0038439 | Length: | 2240 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_444374.2 | Gene: | Pcdhb19 / 93890 | MGIID: | 2136757 | Length: | 801 | Species: | Mus musculus |
Alignment Length: | 1026 | Identity: | 231/1026 - (22%) |
---|---|---|---|
Similarity: | 345/1026 - (33%) | Gaps: | 409/1026 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 783 VEENVVGGIIGQLLYKNGINLVNNELGTYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRR 847
Fly 848 LVGDANIKLRYIIANQQEVVNKISITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVSGAGIYQ 912
Fly 913 VNIKVDDVNDNAPKFNALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEF 977
Fly 978 SIEYVNGTSSENSTHHKMPSTTGAFNIFNLTDQWN-DEFKYQELHTTFMQTNFKLSSGPYFRISY 1041
Fly 1042 TGKRGLDREKQQLYNLKIIAADTGGL---SGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREY 1103
Fly 1104 TTDMEIYFVESSSGMTAPQATAAMMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKSRRRMVR 1168
Fly 1169 ALTTKCPLFAIYEDTPVGTKVLQLSASDEDFGKNALLHYELQ--GEQVERTPGMPMLRVHGVKYF 1231
Fly 1232 AIDKLSGELS----VNYPLSANIEIMLNLTVTDIDGLKDSTCLRFTVMDVNNHAPTFKKSWYSFD 1292
Fly 1293 TPEGEYKDSVLGQLTAI-DMDFGENANITYTLSDSHLPFTIKPASGV-----LKIGGQLDRELKD 1351
Fly 1352 KYSFQVIATD-NAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVY 1415
Fly 1416 KAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYSIRH-QEMQ---APLFQIDSRDGTISTISRI 1476
Fly 1477 NGYNDYEHLNV---SVIASDVGSPALSATAIVIVNLQGQAVTDPPKSTPKPEPPANVTVFQHAYY 1538
Fly 1539 EVKLTENNEAPIEVMRLNLSAGLNPENYRWSLWLEEGLDETDAHPPFEYDAKNMLLYALKPFDRE 1603
Fly 1604 HISRYQLRIRADRLSREARNYARVSYPVVDERIEGLSLNECRILVHIADENDNAPKFRGNGQPIV 1668
Fly 1669 AVLPQSASFGYPVTRVEANDLDEGLNAEIRYRLL--NEPARLFGIDELSGNI---RLLGELSRTE 1728
Fly 1729 HIYGFDVKATDRMGADDGRSGIVNVFVYIINEAKQVRL---VVAGMPVEVE 1776 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad89D | NP_650554.3 | Cadherin_repeat | 183..290 | CDD:206637 | |
Cadherin_repeat | 325..407 | CDD:206637 | |||
Cadherin_repeat | 416..524 | CDD:206637 | |||
Cadherin_repeat | 534..626 | CDD:206637 | |||
Cadherin_repeat | 641..>714 | CDD:206637 | |||
CA | 851..925 | CDD:214520 | 18/73 (25%) | ||
CA | 1026..1085 | CDD:214520 | 18/61 (30%) | ||
Cadherin_repeat | 1177..1280 | CDD:206637 | 28/108 (26%) | ||
Cadherin_repeat | 1289..1385 | CDD:206637 | 33/102 (32%) | ||
Cadherin_repeat | 1414..1510 | CDD:206637 | 29/102 (28%) | ||
CA | 1576..1658 | CDD:214520 | 4/81 (5%) | ||
Cadherin_repeat | 1666..1760 | CDD:206637 | 34/98 (35%) | ||
Pcdhb19 | NP_444374.2 | Cadherin_2 | 32..112 | CDD:285466 | 24/122 (20%) |
Cadherin_repeat | 137..238 | CDD:206637 | 41/155 (26%) | ||
Cadherin_repeat | 247..343 | CDD:206637 | 31/173 (18%) | ||
Cadherin_repeat | 356..447 | CDD:206637 | 30/96 (31%) | ||
Cadherin_repeat | 455..557 | CDD:206637 | 32/156 (21%) | ||
Cadherin_repeat | 576..664 | CDD:206637 | 33/92 (36%) | ||
Cadherin_C_2 | 687..769 | CDD:293101 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |