Sequence 1: | NP_650554.3 | Gene: | Cad89D / 42006 | FlyBaseID: | FBgn0038439 | Length: | 2240 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_444370.1 | Gene: | Pcdhb15 / 93886 | MGIID: | 2136750 | Length: | 786 | Species: | Mus musculus |
Alignment Length: | 997 | Identity: | 205/997 - (20%) |
---|---|---|---|
Similarity: | 325/997 - (32%) | Gaps: | 389/997 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 816 SEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYIIANQQEVVNKISITEDGTLLT 880
Fly 881 LTGLDREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDVNDNAPKFNALTYVGLINENCVVGTE 945
Fly 946 LSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHHKMPSTTGAFNIFNLTDQ 1010
Fly 1011 WNDEFKYQELHTTFMQTNFKLSSGPYFRIS-YTGKRG-----------LDREKQQLYNLKIIAAD 1063
Fly 1064 TGG--LSGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVESSSGMTAPQATAA 1126
Fly 1127 MMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKSRRRMVRALTTKCPLFAIYEDTPVGTKVLQ 1191
Fly 1192 LSASDEDFGKNALLHYEL--QGEQVERTPGMPMLRVHGVKYFAIDKLSGELSVNYPLSANIEIML 1254
Fly 1255 NLTVT----DIDGLKDSTCLRFTVMDVNNHAPTFKKSWYSFDTPEGEYKDSVLGQLTAIDMDFGE 1315
Fly 1316 NANITYTLSDSHLPFTIKPASG---VLKIGGQLDRELKDKYSFQVIATDNAPVMQRMSSSVDVEV 1377
Fly 1378 NVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAYLDRSTQPGTFVRQLTAIDKDNVGN 1442
Fly 1443 GNGLVLYSIRHQEMQAPLFQIDSRDGTISTISRINGYNDYEHLNVSVIASDVGSPALSATAIVIV 1507
Fly 1508 NLQGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENNEAPIEVMRLNLSAGLNPENYRWSLWL 1572
Fly 1573 EEGLDETDAHPPFEYDAKNMLLYALKPFDREHISRYQLRIRADRLSREARNYARVSYPVVDERIE 1637
Fly 1638 GLSLNECRILVHIADENDNAP----KFRGNGQPIVAVLPQSASFGYPVTRVEANDLDEGLNAEIR 1698
Fly 1699 YRLL--NEPARLFGIDELSGNI---RLLGELSRTEHIYGFDVKATDRMGADDG---RSGIVNVFV 1755
Fly 1756 YIINEAKQVRLVVAGMPVEVER 1777 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad89D | NP_650554.3 | Cadherin_repeat | 183..290 | CDD:206637 | |
Cadherin_repeat | 325..407 | CDD:206637 | |||
Cadherin_repeat | 416..524 | CDD:206637 | |||
Cadherin_repeat | 534..626 | CDD:206637 | |||
Cadherin_repeat | 641..>714 | CDD:206637 | |||
CA | 851..925 | CDD:214520 | 17/73 (23%) | ||
CA | 1026..1085 | CDD:214520 | 24/72 (33%) | ||
Cadherin_repeat | 1177..1280 | CDD:206637 | 32/108 (30%) | ||
Cadherin_repeat | 1289..1385 | CDD:206637 | 26/98 (27%) | ||
Cadherin_repeat | 1414..1510 | CDD:206637 | 13/95 (14%) | ||
CA | 1576..1658 | CDD:214520 | 17/81 (21%) | ||
Cadherin_repeat | 1666..1760 | CDD:206637 | 35/101 (35%) | ||
Pcdhb15 | NP_444370.1 | Cadherin_2 | 30..111 | CDD:285466 | 17/88 (19%) |
Cadherin_repeat | 140..238 | CDD:206637 | 33/162 (20%) | ||
Cadherin_repeat | 247..343 | CDD:206637 | 35/175 (20%) | ||
Cadherin_repeat | 356..447 | CDD:206637 | 26/94 (28%) | ||
Cadherin_repeat | 455..557 | CDD:206637 | 28/258 (11%) | ||
Cadherin_repeat | 571..664 | CDD:206637 | 35/100 (35%) | ||
Cadherin_C_2 | 686..769 | CDD:293101 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |