DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad89D and Fat1

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:XP_017455748.1 Gene:Fat1 / 83720 RGDID:621254 Length:4624 Species:Rattus norvegicus


Alignment Length:2309 Identity:510/2309 - (22%)
Similarity:822/2309 - (35%) Gaps:684/2309 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 EDAQVGKEILRLQAYPRSTAALKGADASGDHKYFNLTEHNATTLVVSLARSLERLVDRDVPRNLL 144
            |:.|....::.:||  .|...||...:..|...|:....|..|.|:::...|:   ....|...|
  Rat  2217 ENVQTHSPVVHVQA--NSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLD---FESHPAYKL 2276

  Fly   145 KFRI---LCAGKQEKLEEGSYLSITVYIEDVNDNAPEFLNVPYVVDVDENTSIESIIFEGVQAFD 206
            ..|.   |.....|       :.:.:.:||:|||.|.|:...|...:.|.:.|.:.|.: |:|.|
  Rat  2277 SIRATDSLTGAHAE-------VFVDIVVEDINDNPPVFVQQSYSTTLSEASVIGAPILQ-VRATD 2333

  Fly   207 RDKPNTPNSEVHFSMSTVPEQLSADGS---PYFALKSPHRPLLILKRELDFDNGIRQFKLPIFAW 268
            .|  :.||..:.:       ||..:.|   .:|.:.| |..|:.|.|.||::. .:|.||.:.|.
  Rat  2334 SD--SEPNRGISY-------QLIGNHSKSHDHFHIDS-HTGLISLVRALDYEQ-FQQHKLLVRAV 2387

  Fly   269 DRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFAPPIMAFDQDSL 333
            |.|.|...::..:|::|.|::|.||.|.:.||..||:| :...|       :|...:.|.|.|..
  Rat  2388 DGGMPPLSSDVVVTVDVTDLNDNPPLFEQQVYEARISE-HAAHG-------HFVMCVKACDADRS 2444

  Fly   334 NAS-LVYDIISGNERQLFRVNPHNGVMYLQKEIDLEEESLPGNTFVLQLEARQKDNPLKKAL--- 394
            :.. |.|.|:|||:.:.|.::...|::.|                         .||.:..|   
  Rat  2445 DLDRLEYSILSGNDHKSFVIDGETGIITL-------------------------SNPRRHTLKPF 2484

  Fly   395 ---------------ARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENS 444
                           ||:.|.|:..|.:.|.|..:.|.:.:.||.|....|:||.|.|||.|...
  Rat  2485 YSLNVSVSDGVFRSSARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVVQVKATDRDSGIYG 2549

  Fly   445 EFLYNLVE--------TKDAAGAFRIDSRTGWITVRDDRLLDREQRRSIQLNVEALERNPSYLDD 501
            ...|:||.        ..|....|.::        |.||....|:..|::|              
  Rat  2550 HLTYHLVNDFAKDRFYVNDGGQVFTLE--------RLDREAPAEKVISVRL-------------- 2592

  Fly   502 KHLKKPGPSKV---QVEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGH 563
              :.|....||   .|.:.|.|.|||.|:| ....||..|..:|..|..:.:|.|.|.|||.|..
  Rat  2593 --MAKDAGGKVAFCTVNVILTDDNDNAPQF-RSTKYEVNVGSSAAKGTSVVKVFASDADEGSNAD 2654

  Fly   564 LLYELQRPKGSGYIPFRLDNKNGTI-----YVGGPLRRGRIAVFVEATDQPTNPSERRFSLAVIT 623
            :.|.::....|......::...|.|     .:|  |.......||.|.|..:.|.|.       .
  Rat  2655 VTYAIEADSESVEENLEINQLTGLITTKESLIG--LENEFFTFFVRAVDNGSPPKES-------V 2710

  Fly   624 IEVYATI---DDQAIDFVGAPYEFWVGANTPLGTSVGQVRTTLIYEGGDEIMYDLLHTYSEGVP- 684
            :.||..|   :.|...|....|.:.:..:.|:||.:..:|.    |....::|.|:   ....| 
  Rat  2711 VPVYVKILPPEVQLPRFSEPFYTYSISEDMPIGTEIDLIRV----EHSGTVLYTLV---KGNTPE 2768

  Fly   685 ------FAIEERSGIITVIRELSEFKRKVYQFEAVANYLFANSSQSLVMSRSSSPLTTIASPAEL 743
                  |.|:.:||.:.:.:.|.....|.|||..:|.                         ..|
  Rat  2769 SNRDEFFVIDRQSGRLKLEKSLDHETTKWYQFSILAR-------------------------CTL 2808

  Fly   744 SD-EGVLITNLTIHIVNKPEQKVPLRPVIEEINMNVIHFHVEENVVGGIIGQLLYKNGINLVNNE 807
            .| |.|...:::|.:.:..:..    ||:|.   |.....:.||:..|                 
  Rat  2809 DDYEVVASIDVSIQVKDANDNS----PVLES---NPYEAFIVENLPAG----------------- 2849

  Fly   808 LGTYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYIIANQQ--EVVNKI 870
                        ||.|.:          |:|.        |....|.::.|.:...|  :::...
  Rat  2850 ------------SRVIQV----------RASD--------LDSGVNGQVMYSLDQSQDADIIESF 2884

  Fly   871 SIT-EDGTLLTLTGLDREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDVNDNAPKFNALTYVG 934
            :|. |.|.:.||..||.|::.||::.|:.......|..:....|::.|.||||:.|:|.|..|.|
  Rat  2885 AINMETGWITTLKELDHEERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKG 2949

  Fly   935 LINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIE---YVNGTSSENSTHHKMP 996
            .::|:...|..:::   :...|||               |:|.:.:   ::.|..:         
  Rat  2950 TVSEDDPPGGVIAI---LSTTDAD---------------SEEINRQVSYFITGGDA--------- 2987

  Fly   997 STTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQLYNLKIIA 1061
              .|.|.:.|:.:.|                          |: |. |:.||||::..|.|.:.|
  Rat  2988 --LGQFAVENMQNDW--------------------------RV-YV-KKPLDREQKDSYLLTVTA 3022

  Fly  1062 ADTGGLSGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVESSSGMTAPQATAA 1126
            .| |..|..|.:.|.|.|.|||:|:.|| :.:.|                               
  Rat  3023 TD-GTFSSKARVEVKVLDANDNSPVCER-TAYSD------------------------------- 3054

  Fly  1127 MMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKSRRRMVRALTTKCPLFAIYEDTPVGTKVLQ 1191
                                                               ||.||...|..|:|
  Rat  3055 ---------------------------------------------------AIPEDALPGKLVMQ 3068

  Fly  1192 LSASDEDFGKNALLHYELQGEQVERTPGMPMLRVHGVKYFAIDKLSGELSVNYPLSANIEIMLNL 1256
            :||:|.|...||.:.|.|.|.              |.:.|.::..:|||.....|....:.:.:|
  Rat  3069 VSATDADIRSNAEITYTLFGS--------------GAEKFKLNPDTGELRTLALLDREEQAVYHL 3119

  Fly  1257 TV--TDIDGLKDSTCLRFTVMDVNNHAPTFKKSWYSFDTPEGEYKDSVLGQLTAIDMDFGENANI 1319
            .|  ||..|......:..|:.|||::.|.|....|:....|.....:.|.::.|.|.|.|.|..|
  Rat  3120 LVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDADAGLNRKI 3184

  Fly  1320 TYTLSDS-HLPFTIKPASGVLKIGGQLDRELKDKYSFQVIATDNAPVMQRMSSSVDVEVNVLDIN 1383
            :|:|.|| ...|:|...||:|::...|||||:..|:..:.|.|.. :.::::::..|.|:|||||
  Rat  3185 SYSLLDSADGQFSINEQSGILQLEKHLDRELQAVYTLTLKAADQG-LPRKLTATGTVVVSVLDIN 3248

  Fly  1384 DNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVL 1448
            ||.|.| .|.:                    |.|.:......||.|.|:.|..:|...|..  :.
  Rat  3249 DNPPVF-EYRE--------------------YGATVSEDIVIGTEVLQVYAASRDIEANAE--IT 3290

  Fly  1449 YSI----RHQEMQAPLFQIDSRDGTISTISRINGYNDYEHLN---VSVIASDVGSPALSATAIVI 1506
            |:|    .|.:     |.|||:.|.|..|..:    |||..:   ::|.|:|.|:|:||..|.|.
  Rat  3291 YAIISGNEHGK-----FSIDSKTGAIFIIENL----DYESSHGYYLTVEATDGGTPSLSDVATVN 3346

  Fly  1507 VNLQGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENN--EAPIEVMRLNLSAGLNPENYRWS 1569
            :|     :||...::|         ||....|...::|:.  |.|:..:..:.:.|  |.|....
  Rat  3347 IN-----ITDINDNSP---------VFSQDSYTTVVSEDAALEQPVITIMADDADG--PSNSHIL 3395

  Fly  1570 LWLEEGLDETDAHPPFEYDAKNMLLYALKPFDREHISRYQLRIRADRLSREARNYARVSYPVVDE 1634
            ..:.||    :...||..|.....:...||.|||.||.|.|.::|    .:..|..||       
  Rat  3396 YSIIEG----NQGSPFTIDPVRGEIKVTKPLDRETISGYTLTVQA----ADNGNPPRV------- 3445

  Fly  1635 RIEGLSLNECRILVHIADENDNAPKFRGNGQPIVAVLPQSASFGYPVTRVEANDLDEGLNAEIRY 1699
                   |...:.:.::|.|||||.|..:...:  ::.::...|:.|.::...|.|...|.    
  Rat  3446 -------NTTTVNIDVSDVNDNAPLFSRDNYSV--IIQENKPVGFSVLKLVVTDKDSSHNG---- 3497

  Fly  1700 RLLNEPARLFGIDELSGNIRLLGELSR--------------TEHIYGFDVKATDRMGADDGR--- 1747
                 |...|.|  :|||...:.|:::              .:| |...||.     ||:|:   
  Rat  3498 -----PPFSFAI--VSGNDDNMFEVNQHGVLLTAATVKRKVKDH-YLLHVKV-----ADNGKPQL 3549

  Fly  1748 SGIVNVFVYIINEAKQVRLVVAGMPVEVERRIEGLMEALSDAIGKDVRVRLLEPYSGGL------ 1806
            |.:.::.:.:|.|:.....:   :|:|:.....|                  |.||||:      
  Rat  3550 SSLTHIDIRVIEESIHPPAI---LPLEIFITASG------------------EEYSGGVIGKIHA 3593

  Fly  1807 --EPATNAYIYAVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLDGGKPMPRI----------- 1858
              :...:...|::|||.:.:..:......|         :..:|||.|:.:..:           
  Rat  3594 TDQDVYDTLTYSLDPHMDGLFSVSSTGGKL---------IAHRKLDIGQYLLNVSVTDGKFTTVA 3649

  Fly  1859 ----------LELAEFGQLARPAHASASSFMG-------------------GLEFVT-------- 1886
                      .|:.......|.|:.:...|:|                   .::.|:        
  Rat  3650 DITVHIQQVTQEMLNHTIAIRFANLTPEEFVGDYWRNFQRALRNILGIRKNDIQIVSLQPSEPHS 3714

  Fly  1887 ---VVLLALISLGALIAACCYVCMRQKRRLWSQRDFSASDAGLTYTIAGIGSPRGQKQRRQRQQR 1948
               |:|....|.|..|:.         ::|..:.:.|.:|   ...|.|:              |
  Rat  3715 HLDVLLFVEKSGGTQIST---------KQLLHKINSSVTD---IEEIIGV--------------R 3753

  Fly  1949 HTQRCSKGSTGSQRPTSAFMPESVCSSAQTQSTATATEKLEQQLHHHHQQQAM----ATQQQHHQ 2009
            ......|...|...|.. |..|.|.......|| .:|.:|......||:....    .|....||
  Rat  3754 ILDVFQKLCAGLDCPWK-FCDEKVSVDENIMST-HSTARLSFVTPRHHRTAVCLCKDGTCPPVHQ 3816

  Fly  2010 YLNEQQRQQKREYIDVPLPKSIAKAAAVTSGGDGAVGVGSTPFV------LKYNACQPVN----- 2063
            ...:.......|.:..|..:   |.:.|..||..|...||:...      :||...:..|     
  Rat  3817 GCEDNPCPAGSECVADPREE---KYSCVCPGGGFAKCPGSSSITFTGSSFVKYRLMENENRLEMK 3878

  Fly  2064 ---NLNNYETSLFSLHSTGQD-SGVEFLSSRELYE---------TSPDSFQ-HGGSKRGNNTEVL 2114
               .|..|.:....:::.|.| |.:|..:.|..|:         .|..|.| :.|.....:.|| 
  Rat  3879 LTMRLRTYSSHAVVMYARGTDYSILEIHTGRLQYKFDCGSGPGIVSVQSIQVNDGQWHAVSLEV- 3942

  Fly  2115 CPRHAKAHLELRQPNTDSSDTYEDSLKT---DEPLVAHNCRSANCEHRQHQQHPSHHPHYQNTRF 2176
              ....|.|.|.:.:| :|.|...:|||   |..::.                 ..|...|.|:.
  Rat  3943 --EGNYAKLVLDEVHT-ASGTAPGALKTLNLDNYVIF-----------------GGHLRQQGTKH 3987

  Fly  2177 EKRSCVRHSFSGVKDDLMQQSPQISL--RPRGHA 2208
            .:.:.|.:.|.|..|.:.....::.|  :||.:|
  Rat  3988 GRNTQVANGFRGCMDSIYLNGQELPLNNKPRAYA 4021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 31/109 (28%)
Cadherin_repeat 325..407 CDD:206637 20/100 (20%)
Cadherin_repeat 416..524 CDD:206637 30/118 (25%)
Cadherin_repeat 534..626 CDD:206637 24/96 (25%)
Cadherin_repeat 641..>714 CDD:206637 18/79 (23%)
CA 851..925 CDD:214520 21/76 (28%)
CA 1026..1085 CDD:214520 20/58 (34%)
Cadherin_repeat 1177..1280 CDD:206637 31/104 (30%)
Cadherin_repeat 1289..1385 CDD:206637 33/96 (34%)
Cadherin_repeat 1414..1510 CDD:206637 32/102 (31%)
CA 1576..1658 CDD:214520 21/81 (26%)
Cadherin_repeat 1666..1760 CDD:206637 21/110 (19%)
Fat1XP_017455748.1 Cadherin_repeat 39..145 CDD:206637
Cadherin_repeat 154..253 CDD:206637
Cadherin 278..357 CDD:421759
Cadherin_repeat 372..>444 CDD:206637
Cadherin_repeat 468..566 CDD:206637
Cadherin_repeat 576..663 CDD:206637
Cadherin_repeat 725..819 CDD:206637
Cadherin_repeat 827..924 CDD:206637
Cadherin_repeat 932..1016 CDD:206637
Cadherin_repeat 1043..1136 CDD:206637
Cadherin_repeat 1144..1242 CDD:206637
Cadherin_repeat 1251..1345 CDD:206637
Cadherin_repeat 1363..1476 CDD:206637
Cadherin_repeat 1485..1582 CDD:206637
Cadherin_repeat 1590..1686 CDD:206637
Cadherin_repeat 1695..1785 CDD:206637
Cadherin_repeat 1793..1898 CDD:206637
Cadherin_repeat 1919..1994 CDD:206637
Cadherin_repeat 2008..2101 CDD:206637
Cadherin_repeat 2109..2198 CDD:206637
Cadherin_repeat 2211..2303 CDD:206637 21/97 (22%)
Cadherin_repeat 2311..2410 CDD:206637 31/110 (28%)
Cadherin_repeat 2418..2512 CDD:206637 27/126 (21%)
Cadherin_repeat 2520..2616 CDD:206637 30/119 (25%)
Cadherin_repeat 2625..2718 CDD:206637 26/101 (26%)
Cadherin_repeat 2732..2829 CDD:206637 24/128 (19%)
Cadherin_repeat 2837..2937 CDD:206637 28/146 (19%)
Cadherin_repeat 2946..3043 CDD:206637 32/154 (21%)
Cadherin_repeat 3056..3145 CDD:206637 30/102 (29%)
Cadherin_repeat 3153..3250 CDD:206637 33/97 (34%)
Cadherin_repeat 3258..3355 CDD:206637 34/132 (26%)
Cadherin_repeat 3363..3460 CDD:206637 28/120 (23%)
Cadherin_repeat 3469..3560 CDD:206637 20/109 (18%)
Cadherin_repeat 3585..3658 CDD:206637 11/81 (14%)
LamG 3878..4009 CDD:214598 31/151 (21%)
EGF_CA 4040..4074 CDD:238011
EGF_CA 4077..4112 CDD:238011
EGF 4117..4147 CDD:394967
EGF_CA 4151..4187 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24026
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.