DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad89D and Celsr3

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:NP_112610.1 Gene:Celsr3 / 83466 RGDID:621787 Length:3313 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637
Cadherin_repeat 325..407 CDD:206637
Cadherin_repeat 416..524 CDD:206637
Cadherin_repeat 534..626 CDD:206637
Cadherin_repeat 641..>714 CDD:206637
CA 851..925 CDD:214520
CA 1026..1085 CDD:214520
Cadherin_repeat 1177..1280 CDD:206637
Cadherin_repeat 1289..1385 CDD:206637
Cadherin_repeat 1414..1510 CDD:206637
CA 1576..1658 CDD:214520
Cadherin_repeat 1666..1760 CDD:206637
Celsr3NP_112610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..187
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..269
Cadherin_repeat 321..420 CDD:206637
Cadherin_repeat 428..532 CDD:206637
Cadherin_repeat 541..638 CDD:206637
Cadherin_repeat 646..743 CDD:206637
Cadherin_repeat 751..845 CDD:206637
Cadherin_repeat 853..948 CDD:206637
Cadherin_repeat 956..1054 CDD:206637
Cadherin_repeat 1062..1156 CDD:206637
Cadherin_repeat 1176..1257 CDD:206637
EGF_CA 1428..1462 CDD:238011
EGF_CA 1472..1505 CDD:238011
LamG 1508..1691 CDD:238058
EGF_CA 1717..1748 CDD:238011
LamG 1755..1911 CDD:238058
EGF_CA 1939..1973 CDD:238011
EGF_CA 1973..2011 CDD:238011
Laminin_EGF <1994..2033 CDD:278482
EGF_Lam 2030..>2054 CDD:238012
EGF_Lam 2067..>2105 CDD:238012
HormR 2117..2181 CDD:214468
GAIN 2201..2446 CDD:293098
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2356..2395
GPS 2474..2527 CDD:197639
7tm_2 2534..2766 CDD:278432
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2887..2927
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2977..3004
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3091..3242
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3255..3313
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.