DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and PCDHB10

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:NP_061753.1 Gene:PCDHB10 / 56126 HGNCID:8681 Length:800 Species:Homo sapiens


Alignment Length:1107 Identity:234/1107 - (21%)
Similarity:370/1107 - (33%) Gaps:419/1107 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   800 GINLVNNELGTYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYIIANQQ 864
            |::|..:..|.|  ..:|.|.:...:.:..:....:....:.|  ..|:|.|.|  .:|::.:  
Human    22 GVSLAGSGFGRY--SVTEETEKGSFVVNLAKDLGLAEGELAAR--GTRVVSDDN--KQYLLLD-- 78

  Fly   865 EVVNKISITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDVNDNAPKFNA 929
                    :..|.|||...||||:....:...::.:...:.....||:..::|.|:||:||.|..
Human    79 --------SHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQD 135

  Fly   930 LTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHHK 994
            ...|..|:||...||...:..|   ||.|.|.|.   :|              |.|.|.||    
Human   136 KETVLKISENTAEGTAFRLERA---QDPDGGLNG---IQ--------------NYTISPNS---- 176

  Fly   995 MPSTTGAFNIFNLTDQWNDE-FKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQLYNLK 1058
                     .|::.....|| ..|.||                     ...:.||||:|...:|.
Human   177 ---------FFHINISGGDEGMIYPEL---------------------VLDKALDREEQGELSLT 211

  Fly  1059 IIAADTG--GLSGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVESSSGMTAP 1121
            :.|.|.|  ..||.:.:.::|.|||||||.|                                  
Human   212 LTALDGGSPSRSGTSTVRIVVLDVNDNAPQF---------------------------------- 242

  Fly  1122 QATAAMMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKSRRRMVRAL-TTKCPLFAIYEDTPV 1185
                                                         .:|| .|:.|     |::|:
Human   243 ---------------------------------------------AQALYETQAP-----ENSPI 257

  Fly  1186 GTKVLQLSASDEDFGKNALLHYEL--QGEQVERTPGMPMLRVHGVKYFAIDKLSGEL----SVNY 1244
            |..::::.|.|.|.|.||.:.|..  ..|.:..|             |.|:..|||:    .::|
Human   258 GFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTT-------------FQINPFSGEIFLRELLDY 309

  Fly  1245 PLSANIEIMLNLTVTDIDGLKDSTCLRFTVMDVNNHAPTFKKSWYSFDTPEGEYKDSVLGQLTAI 1309
            .|..:.:|  |:...|..||.....:...|:|.|::.|....|.:|....|.. .::.|......
Human   310 ELVNSYKI--NIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS-PETPLAVFKIN 371

  Fly  1310 DMDFGENANITYTLSDSHLPFTIKPASG---VLKIGGQLDRELKDKYSFQVIATD-NAPVMQRMS 1370
            |.|.|||..:...:.: :|||.:||:..   :|...|.||||::.:|:..:..|| ..|   |:.
Human   372 DRDSGENGKMVCYIQE-NLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTP---RLK 432

  Fly  1371 SSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAYLDRSTQPGTFVRQLTAI 1435
            :..::.|.|.|:|||.|.|    .||.                 |..::..:..|...:..::|.
Human   433 TEHNITVLVSDVNDNAPAF----TQTS-----------------YTLFVRENNSPALHIGSVSAT 476

  Fly  1436 DKDNVGNGNGLVLYSIRHQEMQAPLFQIDSRDGTISTISRINGYNDYEHLNVSVIASDVGSPALS 1500
            |:|:  ..|..|.||:           :..:|                             |.|.
Human   477 DRDS--GTNAQVTYSL-----------LPPQD-----------------------------PHLP 499

  Fly  1501 ATAIVIVNLQGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENNEAPIEVMRLNLSAGLNPEN 1565
            ..::|.:|                                                         
Human   500 LASLVSIN--------------------------------------------------------- 507

  Fly  1566 YRWSLWLEEGLDETDAHPPFEYDAKNMLLYALKPFDREHISRYQLRIRA-DR----LSREARNYA 1625
                                   |.|..|:||:..|.|.:..::.|:.| ||    |||||.   
Human   508 -----------------------ADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREAL--- 546

  Fly  1626 RVSYPVVDERIEGLSLNECRILVHIADENDNAP----KFRGNGQPIVAVLPQSASFGYPVTRVEA 1686
                              .|:||  .|.|||:|    ..:....|...::|::|..||.||:|.|
Human   547 ------------------VRVLV--LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVA 591

  Fly  1687 NDLDEGLNAEIRYRLL--NEPARLFGIDELSGNI---RLLGELSRTEHIYGFDVKATDRMGADDG 1746
            .|.|.|.||.:.|:||  .||. |||:...:|.:   |||.|....:|.....||       |:|
Human   592 VDGDSGQNAWLSYQLLKATEPG-LFGVWAHNGEVRTARLLSERDAAKHRLVVLVK-------DNG 648

  Fly  1747 ---RSGIVNVFVYIINEAKQVRL-VVAGMPVEVERRIEGLMEALSDAIGK-----------DVRV 1796
               ||....:.:.:::...|..| :....|.:.:...:.|...|..|:..           .|.|
Human   649 EPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAV 713

  Fly  1797 RLLE---------------PYSG------GLEPATNAYIYAV----DPHTNSIMEMEQLQDALAG 1836
            ||..               |:.|      |.|..:.:|.|.|    .|.|:   |.:.|:..::.
Human   714 RLCRRSRAASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTS---EFKFLKPVISD 775

  Fly  1837 LQ 1838
            :|
Human   776 IQ 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637
Cadherin_repeat 325..407 CDD:206637
Cadherin_repeat 416..524 CDD:206637
Cadherin_repeat 534..626 CDD:206637
Cadherin_repeat 641..>714 CDD:206637
CA 851..925 CDD:214520 17/73 (23%)
CA 1026..1085 CDD:214520 17/60 (28%)
Cadherin_repeat 1177..1280 CDD:206637 27/108 (25%)
Cadherin_repeat 1289..1385 CDD:206637 28/99 (28%)
Cadherin_repeat 1414..1510 CDD:206637 14/95 (15%)
CA 1576..1658 CDD:214520 23/86 (27%)
Cadherin_repeat 1666..1760 CDD:206637 34/101 (34%)
PCDHB10NP_061753.1 Cadherin_2 32..112 CDD:285466 17/95 (18%)
Cadherin_repeat 139..238 CDD:206637 39/152 (26%)
Cadherin_repeat 247..343 CDD:206637 29/115 (25%)
Cadherin_repeat 355..447 CDD:206637 27/96 (28%)
Cadherin_repeat 455..557 CDD:206637 35/263 (13%)
Cadherin_repeat 576..664 CDD:206637 33/95 (35%)
Cadherin_C_2 688..770 CDD:293101 17/84 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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