DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and CadN

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:NP_001027277.1 Gene:CadN / 35070 FlyBaseID:FBgn0015609 Length:3101 Species:Drosophila melanogaster


Alignment Length:1920 Identity:428/1920 - (22%)
Similarity:712/1920 - (37%) Gaps:493/1920 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 EDAQVGKEILRLQAYP------RSTAALKGADASGDHKYFNLTEHNATTLVVSLARSLERLVDRD 138
            |:.:...:|:.::|..      |.|...:|..|.    .||:   ..|:.:|.||:.|    |.:
  Fly   662 ENQKKDSDIISIKAKSFADREIRYTLKAQGQGAG----TFNI---GPTSGIVKLAKEL----DFE 715

  Fly   139 VPRNLLKFRILCAGKQEKLEEGSYLSITVYIEDVNDNAPEFLNVPYVV-DVDENTSIESIIFEGV 202
            ..|....:.::....::.....:.:.:|:.:.|||||||:|....|.. :|||:..:.:.|.. |
  Fly   716 DLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILR-V 779

  Fly   203 QAFDRDKPNTPNSEVHFSMSTVPEQLSADGSPYFALKSPHRPLLILKRELDFDNGIRQFKLPIFA 267
            :|.|.|..:  |:|:.:.:|          ..:||:.|  ..:::..::||.||....::..:.|
  Fly   780 KAMDSDSGS--NAEIEYLVS----------DDHFAVDS--NGIIVNNKQLDADNNNAYYEFIVTA 830

  Fly   268 WDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFAPPIMAFDQDS 332
            .|:|.|......|:.:..::.:|..|||::.||...::|   ..|     |......::|.|:|.
  Fly   831 KDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDE---NAG-----PNTLVTTVVASDKDG 887

  Fly   333 LNASLVYDIISGNERQLFRVNPHNGVMYL-QKEIDLEEESLPGNTFVLQLEARQK-------DNP 389
            .|....: :..|.....|.:....||:.| .|.|.|:::.     :.|.:.|...       |..
  Fly   888 DNVRFGF-VGGGTSSGQFVIEDITGVIRLHNKAISLDKDK-----YELNVTAMDDGSCCVNGDQT 946

  Fly   390 LKKALARIEVEVLDLNDNVPEFE--ADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVE 452
            :..:.|.:.|.:.|:|||.|.|:  :.||. .:.|..|.|..|::|.|.|.|:|.|.:..|::|:
  Fly   947 IHTSTAVVVVFITDVNDNKPVFKDCSTYYP-KVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQ 1010

  Fly   453 TKDAAGA-FRIDSRTGWITVRDDRLLDRE--QRRSIQLNVEALERNPSYLDDKHLKKPGPSKVQV 514
            ..:..|. |.:|..||  .|..:::.|||  ..:.:.:.|:|.::....|:       |.....|
  Fly  1011 QPNQKGTKFTVDEETG--EVSTNKVFDREGDDGKFVSVTVKATDQGDPSLE-------GVCSFTV 1066

  Fly   515 EITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGSGYIP- 578
            |||  |.|||.|.|:.....| .|..:|..|..|.:|.|.|.|...||.::|.|..|.....:. 
  Fly  1067 EIT--DVNDNPPLFDRQKYVE-NVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEY 1128

  Fly   579 FRLDNKNGTIYVGGPL----RRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATIDDQAIDFVG 639
            |.:..::|.|.:..||    .|.|..:.|.|:|:.| |:    |.|.:.:|:      ..:|...
  Fly  1129 FEIQAESGWIVLKKPLDGCYPRDRYRLRVSASDKGT-PA----SAADVDVEL------DVVDRNN 1182

  Fly   640 APYEFW---------VGANTPLGTSVGQVRTTLIYEGGDEIMYDLL----------HTYSEGVPF 685
            .| ..|         :..|..:||.|..|:.:...||...:.|.|:          ||      |
  Fly  1183 KP-PIWDKSIYGPIHIRENVTVGTVVTSVKASSGIEGNPTVFYRLMPGSTAQTNKFHT------F 1240

  Fly   686 AIEERS------GIITVIRELSEFKRKVYQFEAVANYLFANSSQSLVMSRSSSPLTTIASPAELS 744
            .:::|.      ..|.|...|        .:|::..|                            
  Fly  1241 YLQQRPDNGDTWADIKVNHPL--------DYESIKEY---------------------------- 1269

  Fly   745 DEGVLITNLTIHIVNKPEQKVPLRPVIEEINMNVIHFHVEENVVGGIIGQLLYKNGINLVNNELG 809
                   ||||.:.|...|::        .:...::..:|:                  ||:|:.
  Fly  1270 -------NLTIRVENNGAQQL--------ASEATVYIMLED------------------VNDEIP 1301

  Fly   810 TYREMPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYII---ANQQEVVNKIS 871
            .:.|...|.......:|::....|   :.......|...|      ..||:   .|:.:...:|:
  Fly  1302 LFTEREQETVLEGEPIGTKVTQVN---AIDKDGTFPNNQV------YYYIVDSPRNEGKEFFEIN 1357

  Fly   872 ITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVS--------GAGIYQVNIKVDDVNDNAPKFN 928
            : :.|.:.|.|..|||::.:|.|.  ||...|..|        .:....:.|.:.|.|||.|.|:
  Fly  1358 L-QSGEIFTKTVFDREKKGAYALE--VEARDGAPSARPNSNGPNSVTKFIRIGIADKNDNPPYFD 1419

  Fly   929 ALTYVGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHH 993
            ...|...::||      ..:.|.:|...|.:           .|.|.....|..:|         
  Fly  1420 KSLYEAEVDEN------EDIQHTVLTVTAKD-----------HDESSRIRYEITSG--------- 1458

  Fly   994 KMPSTTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQLYNLK 1058
               :..|||.:.|:|.                            .|...|  .||.|.::.|.|:
  Fly  1459 ---NIGGAFAVKNMTG----------------------------AIYVAG--ALDYETRRRYELR 1490

  Fly  1059 IIAADTGGLSGYAHLTVLVADVNDNAPMFERIS-----VFKDSR------LEIREYTTDME---- 1108
            :.|:| .....|..:.:.|.|||||.|:|||.:     ..:|.|      |::.....|.:    
  Fly  1491 LAASD-NLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQN 1554

  Fly  1109 -IYFV---------ESSSGMTAPQATAAMMLAPP-----PYHIPGSP--RFNVDRERSVGAGLGV 1156
             :||:         .::|.....:.|..:.:..|     |   .|.|  ||.|..:...|.||..
  Fly  1555 IVYFLTGQGIDPDNPANSKFDINRTTGEIFVLKPLDRDQP---NGRPQWRFTVFAQDEGGEGLVG 1616

  Fly  1157 VARAKSRRRMVRALTTKCPLF--AIY-----EDTPVGTKVLQLSASDED---FGKNALLHYELQG 1211
            .|..:..   ::.:....|:|  .:|     |:...|..|:.::|.|.|   .|.||.|.|.::.
  Fly  1617 YADVQVN---LKDINDNAPIFPQGVYFGNVTENGTAGMVVMTMTAVDYDDPNEGSNARLVYSIEK 1678

  Fly  1212 EQVERTPGMPMLRVH---GVKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDIDGLKDSTCLRFT 1273
            ..:|...|.|:..:.   ||...|:..|..|.:.:|        .:.:...|..|||.:......
  Fly  1679 NVIEEETGSPIFEIEPDTGVIKTAVCCLDRERTPDY--------SIQVVAMDGGGLKGTGTASIR 1735

  Fly  1274 VMDVNNHAPTF-KKSWYSFDTPEGEYKDSVLGQ---LTAIDMDFGENANITYTLSDSH----LPF 1330
            |.|:|:..|.| |..|:   |...|...:.|.:   ||....|..|.....|.:.|:.    ..|
  Fly  1736 VKDINDMPPQFTKDEWF---TEVDETDGTALPEMPILTVTVHDEDETNKFQYKVIDNSGYGADKF 1797

  Fly  1331 TI---KPASGVLKIGGQLDRE---LKDKYSFQVIATDNAPVMQRMSSSVD---VEVNVLDINDNR 1386
            |:   ...:|.|||...||.|   ..:.:.|::...|...........|.   |.|.:.|||||:
  Fly  1798 TMVRNNDGTGSLKIVQPLDYEDQLQSNGFRFRIQVNDKGEDNDNDKYHVAYSWVVVKLRDINDNK 1862

  Fly  1387 PEFIGYDDQTKAVKFIPSVADR-TLMLPVYKAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYS 1450
            |.|                 :| .:.:.|::     .|:.||.:.:..|.|.|.  .|...|.||
  Fly  1863 PHF-----------------ERANVEVSVFE-----DTKVGTELEKFKATDPDQ--GGKSKVSYS 1903

  Fly  1451 IRHQEMQAPLFQIDSRDGTISTISRINGYNDYEHLNVSVIASDVGSPALSATAIVIVNLQGQAVT 1515
            |.....:...|.| :::|:: ||.|...........|.::|.|.|||..:|||.:.|.:|     
  Fly  1904 IDRSSDRQRQFAI-NQNGSV-TIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQ----- 1961

  Fly  1516 DPPKSTPK---------PE--PPANVTVFQHAYYEVKLTENNE-----APIEVMRLNLSAGLNPE 1564
            |...:.||         ||  ||..|.       |:..|::::     .|....||:.||.    
  Fly  1962 DINDNAPKFLKDYRPVLPEHVPPRKVV-------EILATDDDDRSKSNGPPFQFRLDPSAD---- 2015

  Fly  1565 NYRWSLWLEEGLDETDAHPPFEYDAKN------MLLYALKPFDREHISRYQLRIRADRLSREARN 1623
                        |...|....|.|.|.      .::.:|:.||||....|.:.|           
  Fly  2016 ------------DIIRASFKVEQDQKGANGDGMAVISSLRSFDREQQKEYMIPI----------- 2057

  Fly  1624 YARVSYPVVDERIEGLSLNECRILVHIADENDNAPKFRGNGQPIVAVLPQSASFGYPVTRVEAND 1688
                   |:.:...........:.|.|.|.|||  |.:...:.|.....|..|...|:.||...|
  Fly  2058 -------VIKDHGSPAMTGTSTLTVIIGDVNDN--KMQPGSKDIFVYNYQGQSPDTPIGRVYVYD 2113

  Fly  1689 LDEG--LNAEIRYRLLNEPARLFGIDELSGNIRLLGELSRTEHIYGFDVKATDRMGADDGRSGIV 1751
            ||:.  .:.:..:..:..|.  |.:||.||.:                   |.|.|..:||..: 
  Fly  2114 LDDWDLPDKKFYWEAMEHPR--FKLDEDSGMV-------------------TMRAGTREGRYHL- 2156

  Fly  1752 NVFVYIINEAKQVRL-VVAGMPVEVERRIEGLMEALSDAIGKDVRVRLLEPYSGGLEPATNAYIY 1815
               .:.:.:.|..:. :.|.:.|.|.       |...:|:.....|||     .|:.......::
  Fly  2157 ---RFKVYDRKHTQTDIPANVTVTVR-------EIPHEAVVNSGSVRL-----SGISDEDFIRVW 2206

  Fly  1816 AVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLD 1850
            .....:.|..:|::.:|.||    |.|..:::.:|
  Fly  2207 NYRTQSMSRSKMDRFRDKLA----DLLNTERENVD 2237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 24/107 (22%)
Cadherin_repeat 325..407 CDD:206637 19/89 (21%)
Cadherin_repeat 416..524 CDD:206637 32/110 (29%)
Cadherin_repeat 534..626 CDD:206637 28/96 (29%)
Cadherin_repeat 641..>714 CDD:206637 19/97 (20%)
CA 851..925 CDD:214520 21/84 (25%)
CA 1026..1085 CDD:214520 16/58 (28%)
Cadherin_repeat 1177..1280 CDD:206637 29/115 (25%)
Cadherin_repeat 1289..1385 CDD:206637 26/111 (23%)
Cadherin_repeat 1414..1510 CDD:206637 28/95 (29%)
CA 1576..1658 CDD:214520 19/87 (22%)
Cadherin_repeat 1666..1760 CDD:206637 20/95 (21%)
CadNNP_001027277.1 Cadherin_repeat 178..301 CDD:206637
Cadherin_repeat 337..396 CDD:206637
E_set 449..541 CDD:298831
Cadherin_repeat 549..>625 CDD:206637
Cadherin_repeat 655..752 CDD:206637 20/100 (20%)
Cadherin_repeat 765..853 CDD:206637 23/102 (23%)
Cadherin_repeat 862..964 CDD:206637 24/115 (21%)
Cadherin_repeat 973..1074 CDD:206637 33/112 (29%)
Cadherin_repeat 1083..1166 CDD:206637 25/84 (30%)
Cadherin_repeat <1219..1298 CDD:206637 19/153 (12%)
Cadherin_repeat 1310..1414 CDD:206637 23/115 (20%)
Cadherin_repeat 1423..1514 CDD:206637 29/150 (19%)
Cadherin_repeat 1522..1630 CDD:206637 19/113 (17%)
Cadherin_repeat 1638..1741 CDD:206637 27/110 (25%)
Cadherin_repeat 1762..1861 CDD:206637 24/98 (24%)
Cadherin_repeat 1871..1966 CDD:206637 30/108 (28%)
Cadherin_repeat 1974..2083 CDD:206637 29/149 (19%)
EGF 2350..2380 CDD:278437
LamG 2385..2570 CDD:238058
EGF_2 <2605..2631 CDD:285248
Laminin_G_2 2665..2800 CDD:280389
EGF_CA 2869..2907 CDD:238011
Cadherin_C 2952..3088 CDD:279398
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464697
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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