DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and ds

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster


Alignment Length:2798 Identity:609/2798 - (21%)
Similarity:1007/2798 - (35%) Gaps:844/2798 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ESEGVRFIRLREDAQVGKEILRLQAYPRSTAALKGADASGDHKYFNLTEHNATTLVVSLARSLER 133
            |:..|| |.:.|.|::|..:....|:.      |.:.:||...| :|.:.:...|....|||...
  Fly   932 EASMVR-ISVPESAELGAPLYAAHAHD------KDSGSSGQVTY-SLVKESGKGLFAIDARSGHL 988

  Fly   134 LVDRDV-----PRNLLKFRILCAGKQEKLEEGSYLSITVYIEDVNDNAPEFLNVPYVVDVDENTS 193
            ::.:.:     .|:.|   |:.|.........:.|:|.|.::|||||.|.|....|.|:|.|:.|
  Fly   989 ILSQHLDYESSQRHTL---IVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRS 1050

  Fly   194 IESIIFEGVQAFDRDKPNTPNSEVHF-----SMSTVPEQL-SADGSPYFALKSPHRPLLILKREL 252
            |.:.|.: |.|.|.|..|  |:.:.:     .:..|...: |:|.|.:|.: .|:...:.|:..|
  Fly  1051 INAQIIQ-VNASDLDTGN--NARITYRIVDAGVDNVTNSISSSDVSQHFGI-FPNSGWIYLRAPL 1111

  Fly   253 DFDNGIRQFKLPIFAWDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFY---PMTGVP 314
            |.:...| ::|.:.|.|.||||..|.|.:.:.|.|.:|..|||.:..|..||.|..   .:.|| 
  Fly  1112 DRETRDR-YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGV- 1174

  Fly   315 IRIPLYFAPPIMAFDQD-SLNASLVYDIISGNERQLFRVNPHNGVMYLQKEIDLEEESLPGNTFV 378
                      :.|.|.| ..||::.|.::..|..  |:|:|..|.:..::.:|.|...|    :.
  Fly  1175 ----------VTASDLDLGENAAIRYSLLPINSS--FQVHPVTGEISTREPLDRELREL----YD 1223

  Fly   379 LQLEARQKDNPLKKALARIEVEVLDLNDNVPEFEADYYN--ISIVENLPTGFSVLQVNAVDRDQG 441
            |.:|||.:..|::.|...:.:.|.|:|||.||. ||...  :|:.|..|.|..|::|.|||||.|
  Fly  1224 LVVEARDQGTPVRSARVPVRIHVSDVNDNAPEI-ADPQEDVVSVREEQPPGTEVVRVRAVDRDHG 1287

  Fly   442 ENSEFLYNLVETKDA--AGAFRIDSRTGWITVRDDRLLDREQRRSIQLNVEALE-RNPSYLDDKH 503
            :|:...|::|:.:|:  .|.|.||..:|  .:|...:||.|:|...:|.|.|.: .||       
  Fly  1288 QNASITYSIVKGRDSDGHGLFSIDPTSG--VIRTRVVLDHEERSIYRLGVAASDGGNP------- 1343

  Fly   504 LKKPGPSKVQVEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGP-------- 560
               |..:...:.:.:||.|||.|.|...:|. |:|..:|..|:|:|.:   .|.|.|        
  Fly  1344 ---PRETVRMLRVEVLDLNDNRPTFTSSSLV-FRVREDAALGHVVGSI---SPIERPADVVRNSV 1401

  Fly   561 -----NGHLLYELQRPKGSGYI--PFRLDNKNGTIYVGGPLRRG-----RIAVFVEATDQPTNPS 613
                 :..:.|.| .|.....|  .|.:|..:|.:.|...|.|.     |:.:....|....||.
  Fly  1402 EESFEDLRVTYTL-NPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQ 1465

  Fly   614 ERRFSLAVITIEVYATIDDQAIDFVGAPYEFWVGANTPLGTSVGQVRTTLIYEG--GDEIMYDLL 676
            .   |...:.||| |.::|.|.::...|.:..|...||:||.:.....|....|  || :.|.|:
  Fly  1466 S---SAITVKIEV-ADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGD-LQYRLI 1525

  Fly   677 HTY---SEGVP-----FAIEERSGIITVIRELSEFKRKVYQFEAVANYLF---ANSSQSLVMSRS 730
            ..:   :|...     |.::..:|.:::...|        .||||..||.   |....|.|..|.
  Fly  1526 RYFPQLNESQEQAMSLFRMDSLTGALSLQAPL--------DFEAVQEYLLIVQALDQSSNVTERL 1582

  Fly   731 SSPLTTIASPAELSDEGVLITNLTIHIV--NKPEQKVPLRPVIEEINMNVIHFH---VEENVVGG 790
            .:.:|......:.:|...       |.|  |....|.....:.:...:..:..|   |:|:  .|
  Fly  1583 QTSVTVRLRILDANDHAP-------HFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDED--SG 1638

  Fly   791 IIGQLLYK------NGINLVNNELGTYREMPS-EPTSRNITMGSRF------RSRNRSRSSKSKR 842
            ..|||.|:      .|...:|::.|....:.| .|.:.::..|.||      :...:....||..
  Fly  1639 DNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSL 1703

  Fly   843 RLPRRLVGDANIKLRYIIANQQEVVNKISITED-------------------------------- 875
            .|...:.|..|...|::     :.|.:.:|.|:                                
  Fly  1704 NLHLIVQGSHNNPPRFL-----QAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVA 1763

  Fly   876 ----------GTLLTLTGLDREQQPSYELTVIV----EYSTGLVSGA------------------ 908
                      |.:.|....|||.|.||.|.|.|    ..|| |.|.|                  
  Fly  1764 NDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQST-LSSSAVRKQRSSDSIGDTSNGQH 1827

  Fly   909 -GIYQVNIKVDDVNDNAPKFNALTYVGL-INENCVVGTELSMNHAILIQDADEGPNAEFRVQLQ- 970
             .:..:.|.|.|||||:|:|...:..|| :.||    :|..:.|.::..|.||||||:....:. 
  Fly  1828 FDVATIYITVGDVNDNSPEFRPGSCYGLSVPEN----SEPGVIHTVVASDLDEGPNADLIYSITG 1888

  Fly   971 GDYSDEFSIEYVNGTSS----------------ENSTHHKMPSTTGAFNIFNLTDQWND---EFK 1016
            |:..::|||:..:|..|                :.|...:..|..|..||....:..||   .||
  Fly  1889 GNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFK 1953

  Fly  1017 YQE----------LHTTFMQTN-------------FKLSSGPYFRISYTGKRG-------LDREK 1051
            ..:          |.|:.:|.:             :.|::...::.:..|:.|       ||||.
  Fly  1954 LSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDREL 2018

  Fly  1052 QQLYNLKIIAADTGGL---SGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVE 1113
            |..||..::|.|.|..   |....:.:.|.|:|||.|:|||..........|:...|.:::..::
  Fly  2019 QASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALD 2083

  Fly  1114 SSSGMTAPQATAAMMLAPPPYHIPGSPRFNVDRERSVGA---------------GLGVVARAK-- 1161
            :..|     |.|.::.:....:...|.:|.::  .|.||               .|.||||.|  
  Fly  2084 ADLG-----ANAEIVYSLNAENSAVSAKFRIN--PSTGALSASQSLASESGKLLHLEVVARDKGN 2141

  Fly  1162 ---SRRRMVRALTTKCP-------------LFAIYEDTPVGTKVLQLSASDEDFGKNALLHYELQ 1210
               |...::..|..:.|             ...:.|::|.||::||:.|...| |:...:.:...
  Fly  2142 PPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSFG 2205

  Fly  1211 GEQVERTPGMPMLRVHGVKYFAIDKLSGELSVNYP------------LSA--------------- 1248
            ....:           |:  .::|.||||:.||.|            :||               
  Fly  2206 AGNED-----------GI--LSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDE 2257

  Fly  1249 -----------------------------NIEIMLNLTVTDIDGLKDSTCLRFTVMDVNNHAPTF 1284
                                         .|.::|.....|...|.....|...:.|.|:::|.|
  Fly  2258 SSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKF 2322

  Fly  1285 KKSWYSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTLSDSH--LPFTIKPA-SGVLKIGGQLD 1346
            .:..:.....||..|.:.:.|:.|.|.|.|.||.:.|.:.|.:  ..|.|:|| ||:::....||
  Fly  2323 SQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLD 2387

  Fly  1347 RELKDKYSFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEF-----IGYDDQTKAVKFIPSVA 1406
            ||::|.|..::||||..  :.:|:.:..:.|.::|:|||:|.|     :...:.|:....|.|::
  Fly  2388 REIRDIYKLKIIATDEG--VPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSIS 2450

  Fly  1407 ------------------------------DRTLMLPVYKAYLD--------------------- 1420
                                          ||.....|.|..||                     
  Fly  2451 ANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEAR 2515

  Fly  1421 -----------------RSTQPGTFVRQLTAI-------------------DKDNVGNGNGLVLY 1449
                             .:.||..:...|.||                   |.|:.|| |..|:|
  Fly  2516 TVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGN-NSKVIY 2579

  Fly  1450 SIRHQEMQAPLFQIDSRDGTIS-TISR----INGYNDYEHLNVSVIASDVGSPALSATAIVIVNL 1509
            .|   |.....|.:...:|.:| .:||    ::...||   .|.:||.|.|.|||.::.::.|..
  Fly  2580 II---EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDY---FVRIIAKDAGKPALKSSTLLRVQA 2638

  Fly  1510 QGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENNEAPIEVMRLNLSAGLNPENYRWSLWLEE 1574
            ....              :..:.|....|..:::|  .||:..:.|.|.              ::
  Fly  2639 NDNG--------------SGRSQFLQNQYRAQISE--AAPLGSVVLQLG--------------QD 2673

  Fly  1575 GLDET------DAHPPFE-YDAKNMLLYALKPFDREHISRYQLRI-------------------- 1612
            .||::      :....|| ..:|.::|  :||.|||....|:||:                    
  Fly  2674 ALDQSLAIIAGNEESAFELLQSKAIVL--VKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGI 2736

  Fly  1613 -----------------RADRLSREARNYARVSYPVV-------------------------DER 1635
                             |:.:...|....|.:.|.:.                         ||.
  Fly  2737 SVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEH 2801

  Fly  1636 ------IEGL--------------------------------SLNECRILVHIADENDNAPKFRG 1662
                  :.|:                                ||...|:.:|  |||||.|||  
  Fly  2802 MFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELH--DENDNEPKF-- 2862

  Fly  1663 NGQPI---VAVLPQSASFGYPVTRVEANDLDEGLNAEIRYRLLNEPA-----RLFGIDELSGNI- 1718
               |:   |..|.::...|..|.|..|:|||:|...::.|.:...|:     ::|.:|..||.: 
  Fly  2863 ---PLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVT 2924

  Fly  1719 -RLLGELSRTEHIYGFDVKATDRMGADDGRSGIVNVFVYIINE--------AKQVRLVVAGMPVE 1774
             ..:.:..:.:. |..::.|:| ||   |:...|.|.|.|.:.        .:..|.|:......
  Fly  2925 SAFVFDYEQRQR-YDMELLASD-MG---GKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVAL 2984

  Fly  1775 VERRIEGLMEALSDAIGKDVRV--RLLEPYSGGLEPATNAYIYAVDPHTNSIMEMEQLQ---DAL 1834
            .:..:.|.:.|.....|.|.||  :|..|:|.          :.|:..:.:::...:|:   |..
  Fly  2985 PQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH----------FKVNRSSGAVLIKRKLKLDGDGD 3039

  Fly  1835 AGLQLDALQLQQQ-KLDGGK----PMPRILELAEFGQLARP------AHASASSFMGGLEFVTVV 1888
            ..|.:|...:... ....|:    ....::|:| ...||.|      |..|:|..:|  ::...:
  Fly  3040 GNLYMDGRDISLVISASSGRHNSLSSMAVVEIA-LDPLAHPGTNLASAGGSSSGSIG--DWAIGL 3101

  Fly  1889 LLA-LISLGALIAACCYVCMRQKRRLWSQRDFSASD-AGLTYT-----------------IAG-- 1932
            |:| |:.|.|......::.||.::...:.:...|:| ||:..|                 |:|  
  Fly  3102 LVAFLLVLCAAAGIFLFIHMRSRKPRNAVKPHLATDNAGVGNTNSYVDPSAFDTIPIRGSISGGA 3166

  Fly  1933 IGSPRGQKQRRQRQQRHTQRCSKGSTGSQRPTSAFMPESVCSSAQTQSTATATEK-----LEQQL 1992
            .|:..||....:..:........||:|:...:.....|...||.:..:.....::     .|..|
  Fly  3167 AGAASGQFAPPKYDEIPPFGAHAGSSGAATTSELSGSEQSGSSGRGSAEDDGEDEEIRMINEGPL 3231

  Fly  1993 HHHHQQQAMATQ---------QQHHQYL------------------------------NEQQRQQ 2018
            ||.:......:.         |...:||                              ::.....
  Fly  3232 HHRNGGAGAGSDDGRISDISVQNTQEYLARLGIVDHDPSGAGGGASSMAGSSHPMHLYHDDDATA 3296

  Fly  2019 KREYIDVPLPK------------SIAKAAAVTSGGDGAVGV------------GSTPFVLKYNAC 2059
            :.:..::...|            |.|..|..|:|..|.:|.            |..|..:     
  Fly  3297 RSDITNLIYAKLNDVTGAGSEIGSSADDAGTTAGSIGTIGTAITHGHGVMSSYGEVPVPV----- 3356

  Fly  2060 QPV----NNLNNYETSLFSLHS----TGQ-------DSGVEFLS----SRELYETSPDSF-QHGG 2104
             ||    :|:....:|:  :||    ||.       |.|.::..    ..|:.....|:. :|.|
  Fly  3357 -PVVVGGSNVGGSLSSI--VHSEEELTGSYNWDYLLDWGPQYQPLAHVFSEIARLKDDTLSEHSG 3418

  Fly  2105 SKRGNNTEVLCPRHAKAHLE------LRQPNTDSSDTYEDSLKTDEPLVAHNC-RSANCEHR--Q 2160
            |...::.:   .:|:.:|..      :.:|...:..|:     ...||:.:.. |:.|...|  .
  Fly  3419 SGASSSAK---SKHSSSHSSAGAGSVVLKPPPSAPPTH-----IPPPLLTNVAPRAINLPMRLPP 3475

  Fly  2161 H-QQHPSHHP-----HYQNTRFEKRSCVRHSFSGVKDDLMQQSPQI--------------SLRPR 2205
            | ...|:|.|     |..:..|...|.:..|||.....|..:||.|              ||...
  Fly  3476 HLSLAPAHLPRSPIGHEASGSFSTSSAMSPSFSPSLSPLATRSPSISPLGAGPPTHLPHVSLPRH 3540

  Fly  2206 GHA 2208
            |||
  Fly  3541 GHA 3543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 34/112 (30%)
Cadherin_repeat 325..407 CDD:206637 23/82 (28%)
Cadherin_repeat 416..524 CDD:206637 35/112 (31%)
Cadherin_repeat 534..626 CDD:206637 25/111 (23%)
Cadherin_repeat 641..>714 CDD:206637 19/82 (23%)
CA 851..925 CDD:214520 28/138 (20%)
CA 1026..1085 CDD:214520 20/81 (25%)
Cadherin_repeat 1177..1280 CDD:206637 27/158 (17%)
Cadherin_repeat 1289..1385 CDD:206637 32/98 (33%)
Cadherin_repeat 1414..1510 CDD:206637 34/157 (22%)
CA 1576..1658 CDD:214520 30/188 (16%)
Cadherin_repeat 1666..1760 CDD:206637 27/103 (26%)
dsNP_001285551.1 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637
Cadherin_repeat 406..500 CDD:206637
Cadherin_repeat 509..607 CDD:206637
Cadherin_repeat 616..711 CDD:206637
Cadherin_repeat 719..820 CDD:206637
Cadherin_repeat 832..927 CDD:206637
Cadherin_repeat 937..1032 CDD:206637 25/105 (24%)
Cadherin_repeat 1040..1149 CDD:206637 34/113 (30%)
Cadherin_repeat 1158..1252 CDD:206637 29/110 (26%)
Cadherin_repeat 1263..1361 CDD:206637 35/109 (32%)
Cadherin_repeat 1369..1481 CDD:206637 29/120 (24%)
Cadherin_repeat 1489..1598 CDD:206637 27/117 (23%)
Cadherin_repeat 1614..1710 CDD:206637 19/97 (20%)
Cadherin_repeat 1723..1843 CDD:206637 24/120 (20%)
Cadherin_repeat 1853..1948 CDD:206637 25/98 (26%)
Cadherin_repeat 1957..2053 CDD:206637 20/95 (21%)
Cadherin_repeat 2061..2154 CDD:206637 17/99 (17%)
Cadherin_repeat 2170..2318 CDD:206637 27/161 (17%)
Cadherin_repeat 2326..2424 CDD:206637 32/99 (32%)
Cadherin_repeat 2434..2528 CDD:206637 9/93 (10%)
Cadherin_repeat 2549..2641 CDD:206637 25/98 (26%)
Cadherin_repeat 2652..2748 CDD:206637 20/113 (18%)
Cadherin_repeat 2758..2858 CDD:206637 13/101 (13%)
Cadherin_repeat 2866..2960 CDD:206637 25/98 (26%)
Cadherin_repeat 2985..3071 CDD:206637 15/95 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449655
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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