DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and PCDH11X

DIOPT Version :10

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:XP_011529212.1 Gene:PCDH11X / 27328 HGNCID:8656 Length:1376 Species:Homo sapiens


Alignment Length:1251 Identity:255/1251 - (20%)
Similarity:395/1251 - (31%) Gaps:539/1251 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 LARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVETKDAAG 458
            |.:|...:.|:|||.|.|.|...||||.||...........|||.|.|.|....|.|:::::..|
Human   151 LVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFG 215

  Fly   459 AFRIDSRTGWITVRDDRL--------LDREQRRSIQLNVEALERNPSYLDDKHLKKPGPSKVQVE 515
            ...|::..|      |::        ||||::.:..:.|:.       .|....::...:.:||.
Human   216 LDVIETPEG------DKMPQLIVQKELDREEKDTYVMKVKV-------EDGGFPQRSSTAILQVS 267

  Fly   516 ITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGSGYIPFR 580
            :|  |||||.|.|:...: |..:|.|||.|..:.|:.|.|.|.|.|                   
Human   268 VT--DTNDNHPVFKETEI-EVSIPENAPVGTSVTQLHATDADIGEN------------------- 310

  Fly   581 LDNKNGTIYVGGPLRRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATIDDQAIDFVGAPYEFW 645
                                                                             
Human   311 ----------------------------------------------------------------- 310

  Fly   646 VGANTPLGTSVGQVRTTLIYEGGDEIMYDLLHTYSEGVPFAIEERSGIITVIRELSEFKRKVYQF 710
                                                                             
Human   311 ----------------------------------------------------------------- 310

  Fly   711 EAVANYLFANSSQSLVMSRSSSPLTTIASPAELSDEGVLITNLTIHIVNKPEQKVPLRPVIEEIN 775
             |..::.|:|                            |::|:...:                  
Human   311 -AKIHFSFSN----------------------------LVSNIARRL------------------ 328

  Fly   776 MNVIHFHVEENVVGGIIGQLLYKNGINLVNNELGTYREMPSEPTSRNITMGSRFRSRNRSRSSKS 840
                 ||:  |...|:|                 |.:|                           
Human   329 -----FHL--NATTGLI-----------------TIKE--------------------------- 342

  Fly   841 KRRLPRRLVGDANIKLRYIIANQQEVVNKISITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLV 905
                                                      .||||:.|:::|.|:.. ..||:
Human   343 ------------------------------------------PLDREETPNHKLLVLAS-DGGLM 364

  Fly   906 SGAGIYQVNIKVDDVNDNAPKFNALTYVGLINENCVVGTELSMNHAI-LIQDADEGPNAEFRVQL 969
            ....:..||  |.|||||.|..:....|..:|:..|:...:.:|..| ||...|:..:...||..
Human   365 PARAMVLVN--VTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC 427

  Fly   970 QGDYSDEFSIEYVNGTSSENSTHHKMPSTTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSG 1034
                                .|.|::|        |.|...::::              |.|.:.
Human   428 --------------------FTDHEIP--------FRLRPVFSNQ--------------FLLETA 450

  Fly  1035 PYFRISYTGKRGLDREKQQLYNLKIIAADTG--GLSGYAHLTVLVADVNDNAPMFERISVFKDSR 1097
            .|          ||.|..:.|.:|::|||.|  .|:..|.|.:.|.|.|||||:|.:..|     
Human   451 AY----------LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFV----- 500

  Fly  1098 LEIREYTTDMEIYFVESSSGMTAPQATAAMMLAPPPYHIPGSPRFNVDRERSVGAGLGVVARAKS 1162
                                                                             
Human   501 ----------------------------------------------------------------- 500

  Fly  1163 RRRMVRALTTKCPLFAIYEDTPVGTKVLQLSASDEDFGKNALLHYELQGEQVERTPGMPMLRVHG 1227
                    |...|     |:...|.::.::||.|.|.|.||.::|.|       .|..|      
Human   501 --------TVSIP-----ENNSPGIQLTKVSAMDADSGPNAKINYLL-------GPDAP------ 539

  Fly  1228 VKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDIDG----LKDSTCLRFTVMDVNNHAPTFKKSW 1288
             ..|::|..:|.|:|...|....|.....|:...|.    |..:..:..:::|.|:::|.|..:.
Human   540 -PEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNE 603

  Fly  1289 YSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTLSDSHLPFTIKPASGVLKIGGQLDRELKDKY 1353
            |:|..||...:...:|.:|..|.|:|:|:.:|.::.|.:..|||...:||::.....|||.::.|
Human   604 YNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 668

  Fly  1354 SFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAY 1418
            :|.|.|.|...|.:  |||..|.:||:|:|||:|.||          ..||.....|:||     
Human   669 TFYVKAEDGGRVSR--SSSAKVTINVVDVNDNKPVFI----------VPPSNCSYELVLP----- 716

  Fly  1419 LDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYSIRHQEMQAPLFQIDSRDGTISTISRINGYNDYE 1483
               ||.|||.|.|:.|:|.|.  ..|..|.|||.....: .||.||...|.|:.:.:.: ..|..
Human   717 ---STNPGTVVFQVIAVDNDT--GMNAEVRYSIVGGNTR-DLFAIDQETGNITLMEKCD-VTDLG 774

  Fly  1484 HLNVSVIASDVGSPALSATAIVIVNL-QGQAVTDPP-------KSTPKPEPP----ANVTVFQHA 1536
            ...|.|.|:|:|.|. |..::||||| ..::||:..       |||..|..|    |:|:.....
Human   775 LHRVLVKANDLGQPD-SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSD 838

  Fly  1537 YYEV------------------KLTENNEAP-IEVMRLNLS----AGLNPENYRWSLWLEEGLDE 1578
            |.::                  .:....:|| ::..:.|..    |..||||.:..:..::  .:
Human   839 YVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKK--KK 901

  Fly  1579 TDAHPPFEYDAKNMLL 1594
            ...|.|     ||:||
Human   902 KKKHSP-----KNLLL 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637
Cadherin_repeat 325..407 CDD:206637 4/12 (33%)
Cadherin_repeat 416..524 CDD:206637 30/115 (26%)
Cadherin_repeat 534..626 CDD:206637 12/91 (13%)
Cadherin_repeat 641..>714 CDD:206637 1/72 (1%)
CA 851..925 CDD:214520 17/73 (23%)
CA 1026..1085 CDD:214520 20/60 (33%)
Cadherin_repeat 1177..1280 CDD:206637 25/106 (24%)
Cadherin_repeat 1289..1385 CDD:206637 34/95 (36%)
Cadherin_repeat 1414..1510 CDD:206637 34/96 (35%)
CA 1576..1658 CDD:214520 6/19 (32%)
Cadherin_repeat 1666..1760 CDD:206637
PCDH11XXP_011529212.1 Cadherin_2 57..131 CDD:462413
Cadherin_repeat 172..274 CDD:206637 30/116 (26%)
Cadherin_repeat 282..380 CDD:206637 39/390 (10%)
CA 413..493 CDD:214520 28/131 (21%)
Cadherin_repeat 501..595 CDD:206637 27/112 (24%)
Cadherin_repeat 603..698 CDD:206637 34/96 (35%)
Cadherin_repeat 710..801 CDD:206637 37/103 (36%)
Protocadherin 804..1005 CDD:462451 24/116 (21%)
FAM47 <1215..1283 CDD:405345
Blue background indicates that the domain is not in the aligned region.

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