DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad89D and Fat3

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:XP_038936706.1 Gene:Fat3 / 191571 RGDID:620657 Length:4610 Species:Rattus norvegicus


Alignment Length:2440 Identity:522/2440 - (21%)
Similarity:852/2440 - (34%) Gaps:868/2440 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LREDAQVGKEILRLQAYPRSTAALKGADASGDHKY----------FNLTEHNATTLVVSLARSLE 132
            ::|::::|..:|::.|:...:    |.|  |:.:|          ||:.:.:.   |::.|..|:
  Rat  1051 VKENSRIGTSVLQVTAHDEDS----GRD--GEIQYSIRDGSGLGRFNIDDESG---VITAADILD 1106

  Fly   133 R-----------LVDRD-VPRNLLKFRILCAGKQEKLEEGSYLSITVYI--EDVNDNAPEFLNVP 183
            |           ..||. ||                    .|.:|.|||  ||||||||......
  Rat  1107 RETTASYWLTVYATDRGVVP--------------------LYSTIEVYIEVEDVNDNAPLTSEPI 1151

  Fly   184 YVVDVDENTSIESIIFEGVQAFDRDKPNTPNSEVHFSMSTVPEQLSADGSP--YFALKSPHRPLL 246
            |...|.||:..:..:.: :||.|.|..:  |.::.:.:::        |:|  :||:......:.
  Rat  1152 YYPVVMENSPKDVSVIQ-IQAEDPDSGS--NEKLTYRITS--------GNPQNFFAINIKTGLIT 1205

  Fly   247 ILKRELDFDNGIRQFKLPIFAWDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFYPMT 311
            ...|:||.:.....| |.:...|.|:...|:...:.:.|.|.:|..|:|.|.||:.::       
  Rat  1206 TTSRKLDREQQAEHF-LEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKL------- 1262

  Fly   312 GVPIR------IPLYFAPPIMAFDQD-SLNASLVYDIISGNERQLFRVNPHNGVMYLQKE----- 364
              |.|      .|:|.|   .|||:| ..||.:.|.|:.||:...|.::|..|::..:|:     
  Rat  1263 --PERDRKKRGEPIYRA---FAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTGMVSSRKQFTAGS 1322

  Fly   365 --------ID--------------------------------------LEEESL----------P 373
                    :|                                      :|.:.:          |
  Rat  1323 YDILTIKAVDNGRPQKSSTARLHIEWIKKPPPSPIPLTFDEPFYNFTIMESDKVTEIVGVVSVQP 1387

  Fly   374 GNT----------------FVLQ--------------------------------LEARQKD--- 387
            .||                ::||                                |:|.|:.   
  Rat  1388 ANTPLWFDIIGGKHAREMFYILQTACGQNCSTEGGNFDSSFDAEKGVGTIVIAKPLDAEQRSVYN 1452

  Fly   388 ------NPLKKALARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENSEF 446
                  :....|:.::.:.|||.|||.|||...:|:::|.|::|....:||:.|.|||  |..:.
  Rat  1453 MSVEVTDGTNVAVTQVFITVLDNNDNGPEFSQPHYDVTISEDVPPDTEILQIEATDRD--EKHKL 1515

  Fly   447 LYNLVETKDAAG--AFRIDSRTGWITVRDDRLLDREQRRSIQLNVEALERNPSYLDDKHLKKPGP 509
            .|.:..:.||..  .||||..||.:...:  .||.|.:....||:  :.|:..:...::|     
  Rat  1516 SYTIHSSIDAISMRKFRIDPSTGVLYTAE--RLDHEAQDKHILNI--MVRDQEFPYRRNL----- 1571

  Fly   510 SKVQVEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGPNGHLLYELQRPKGS 574
              .:|.:.:.|.||::|.|.: .|||..|..:|..|.|:.||.|.|.|:|.|..|:|.::  .|:
  Rat  1572 --ARVIVNVEDANDHSPYFTN-PLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIE--AGN 1631

  Fly   575 GYIPFRLDNKNGTIYVG---GPLRRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATIDDQAID 636
            ....|:::...|.|.:.   .....|:..:.|:.|||.:.|..   :.|::.|.: :..|:....
  Rat  1632 TGNTFKIEPVLGIITISKEPDMTAMGQFVLSVKVTDQGSPPMS---ATAIVRISI-SMSDNSHPK 1692

  Fly   637 FVGAPYEFWVGANTPLGTSVGQV----RTTLIYEGGDEIMYDLLHTYSEGVPFAIEERSGIITVI 697
            |....|:..|..|..:||||..:    ::|||||..|..:        .|| |.|...||:||..
  Rat  1693 FTHKDYQAEVNENVDIGTSVILISAISQSTLIYEVKDGNI--------NGV-FTINPYSGVITTR 1748

  Fly   698 RELSEFKRKVYQFEAVAN------------------------YLFANSS---------QSLVMSR 729
            |.|.......||....|.                        :||:..|         .|||.|.
  Rat  1749 RALDYEHTSSYQLIIQATNMAGMASNATVSVQVVDENDNPPVFLFSQYSGSLSEAAPINSLVRSL 1813

  Fly   730 SSSPLTTIASPAELSDEGVLI-------------------------------------------- 750
            .:|||...|:.|:.:...:|:                                            
  Rat  1814 DNSPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHEVIAHFHFHVHVRDS 1878

  Fly   751 ------------TNLTIHIVN-------------------------------KPEQKVPLRPVIE 772
                        .|:.:..||                               .|:.:||......
  Rat  1879 GNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYVGVEVLKVSATDPDSEVPPELTYS 1943

  Fly   773 EINMNVIHFHVEENVVGGIIGQLLYKNGINLVNNEL--------GTYRE------MPSEPTSRNI 823
            .:..:|.||.::.|.     |.|..||. ||..:..        |.:..      |..|.....:
  Rat  1944 LMEGSVDHFLMDPNT-----GVLTIKNN-NLSKDHYMLIVRVSDGKFYSTAMVTIMVKEAMDSGL 2002

  Fly   824 TMGSRFRSRNRSRSSK--SKRRLPRRLVGDANIKLRYIIANQQEVVNKISITEDGTLLTLTGL-- 884
            .....|.|.:.|.:|.  :|..:...:....|..|:|.|.|..   ||..|.....::..||:  
  Rat  2003 HFTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNPG---NKFKIKSTSGVIQTTGVPF 2064

  Fly   885 DREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDVNDNAPKFNALTYVGLINENCVVGTELSMN 949
            |||:|..|||.|........:..|.:. |.:.::|||||:|.|..|.|...:..:...||.:...
  Rat  2065 DREEQELYELVVEASRELDHLRVARVV-VRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTLIYRV 2128

  Fly   950 HAILIQDADEGPNAEFRVQLQGDY-------------------SDEFSIEY------VNGTSSEN 989
            .||   |.|:|.|.|....||.||                   ||..:|:|      .:|.:...
  Rat  2129 TAI---DKDKGANGEVTYVLQDDYGHFEINPNSGNVILKEAFNSDLSNIDYGVTILAKDGGTPSL 2190

  Fly   990 STHHKMPST--TGAFNIFN---LTDQWNDEFKYQELHTTFMQTNFKLSSG-----------PY-- 1036
            ||..::|.|  ..|..:|:   .|...|::.   .::|..:..|.....|           |:  
  Rat  2191 STFVELPITIVNKAMPVFDKPFYTASINEDI---SINTPILSINATSPEGQGIIYLIIDGDPFQQ 2252

  Fly  1037 FRISY-TGK----RGLDREKQQLYNLKIIAADTGGLSG-YAHLTV--LVADVNDNAPMFER---- 1089
            |.|.: ||.    ..||.|...:|.|.:.|:|  .|:| .|.:||  ||.|||||.|:|::    
  Rat  2253 FNIDFDTGVLKVISPLDYEVMSVYKLTVRASD--ALTGARAEVTVDLLVDDVNDNPPVFDQPTYN 2315

  Fly  1090 ----------------ISVFKDS------RLEIREYTTDMEIYF-VESSSGM------------- 1118
                            :|...||      ..:|.:.|.:...|| ::||||:             
  Rat  2316 TTLSESSLIGTPVLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQ 2380

  Fly  1119 ------TA-----PQATAAMMLA---------PPPYH--------------------IPGSPRFN 1143
                  ||     |..::.:::.         ||.::                    :..|...:
  Rat  2381 HCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADS 2445

  Fly  1144 VDRER---SVGAG-----------LGVVARAKSRRRMVRAL------------------------ 1170
            .|.:|   |:.:|           .||:..:..|::.:..|                        
  Rat  2446 SDFDRLEYSILSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVSDGLFTSTAQVHIRVLG 2510

  Fly  1171 -TTKCPLFA-------IYEDTPVGTKVLQLSASDEDFGKNALLHYELQGEQVERTPGMPMLRVHG 1227
             ....|.|:       :.|:...||||:.:.|:|.|.|....:.|.:                  
  Rat  2511 ANLYSPAFSQSTYVAEVRENAASGTKVIHVRATDGDPGTYGQVSYSI------------------ 2557

  Fly  1228 VKYFAIDKL----SGE------LSVNYPLSANIEIMLNLTVTDIDGLKDST-C-LRFTVMDVNNH 1280
            :..||.|:.    :|:      |....||..:|.|.|..    :||...:| | :|..|:|.|::
  Rat  2558 INDFAKDRFLIDSNGQIITTERLDRENPLEGDISIYLRA----LDGGGRTTFCTVRVIVVDENDN 2618

  Fly  1281 APTFKKSWYSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTL---------------------- 1323
            ||.|....|.........:..::.|:.|:|.|.|.|:.|||:|                      
  Rat  2619 APQFMTLEYRASVRADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLEIDPDNGWMV 2683

  Fly  1324 ---------------------------------------SDSHLP-------------------- 1329
                                                   .::.||                    
  Rat  2684 TKGNFNQLRNTVLSFFVKAVDGGIPVRHSLIPVYIHVLPPETFLPSFTQSQYSFTIAEDTSIGST 2748

  Fly  1330 -----------------------------FTIKPASGVLKIGGQLDRELKDKYSFQVIAT---DN 1362
                                         |.|:..:|.:|:..:||.|:...:.|:|.||   |.
  Rat  2749 IDTLRILPNQSVRFSTVNGERPENNKENVFIIEQETGAIKLDKRLDHEVSPAFHFKVAATIPLDK 2813

  Fly  1363 APVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAYLDRSTQPGT 1427
            ..::    .:|||:|.|||:|||:|.|     :|.:                |:..:......||
  Rat  2814 VDIV----FTVDVDVKVLDLNDNKPVF-----ETSS----------------YETIIMEGMPVGT 2853

  Fly  1428 FVRQLTAIDKDNVGNGNGLVLYSIR---HQEMQAPLFQIDSRDGTISTISRINGYNDYEH----- 1484
            .:.|:.|||.|  ...||.|.||:.   |.|.....|.|||..|.|||:      .|.:|     
  Rat  2854 KLAQVRAIDTD--WGANGQVTYSLHSDSHLEKVMEAFNIDSNTGWISTL------KDLDHETDPT 2910

  Fly  1485 LNVSVIASDVGSPALSATAIVIVNLQGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENNEAP 1549
            .:..|:|||:|. |.|.:::.:|:::...:.|            |..||.|..|...:.| ::.|
  Rat  2911 FSFFVVASDLGE-AFSLSSMALVSVKVTDIND------------NAPVFAHEVYRGNVKE-SDPP 2961

  Fly  1550 IEVMRL---------NLS-------AGLNPENYRWSLWLEEGLDETDAHPPFEYDAKNMLLYALK 1598
            .||:.:         |::       .|.||.. |::|    |:.:::           ..:|..:
  Rat  2962 GEVVAVLSTLDKDTSNINRQVSYHITGGNPRG-RFAL----GMVQSE-----------WKVYVKR 3010

  Fly  1599 PFDREHISRYQLRIRADRLSREARNYARVSYPVVDERIEGLSLNECRILVHIADENDNAPKFRGN 1663
            |.|||....|.|.|.|.                     :||.:.:..:.|.::|.|||:|..  :
  Rat  3011 PLDREEQDIYFLNITAS---------------------DGLFVTQAMVEVTVSDVNDNSPVC--D 3052

  Fly  1664 GQPIVAVLPQSASFGYPVTRVEANDLDEGLNAEIRYRLLNEPARLFGIDELSGNIRLLGELSRTE 1728
            .....|.||:.......:.:|.|.|.|.|.|.:|||.|.......|.:|..||.::.|..|.|..
  Rat  3053 QVAYSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNSDFFLDPESGELKTLALLDRER 3117

  Fly  1729 -HIYGFDVKATDRMGADDGR--SGIVNVFVYIINEAKQVRLVVAGMPVEVERRIEGLMEALSDAI 1790
             .:|....:|||    ..||  |..|.:.:..:|:...|...........|......:.....|:
  Rat  3118 VPVYNLIARATD----GGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAV 3178

  Fly  1791 GKDVRVRLLEPYSGGLEPATNAYIYAVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLDGGKPM 1855
            ..||.:.....||  ||.:.:. ::::| .::.::.:||           .|..:||        
  Rat  3179 DPDVGINRKVVYS--LEDSASG-VFSID-SSSGVIVLEQ-----------PLDREQQ-------- 3220

  Fly  1856 PRILELAEFGQLARPAHASASSFMGGLEFVTVVLL 1890
                  :.:....|....|....:..|..||:.:|
  Rat  3221 ------SSYNISVRATDQSPGQSLSSLTSVTITVL 3249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 23/108 (21%)
Cadherin_repeat 325..407 CDD:206637 29/200 (15%)
Cadherin_repeat 416..524 CDD:206637 30/109 (28%)
Cadherin_repeat 534..626 CDD:206637 27/94 (29%)
Cadherin_repeat 641..>714 CDD:206637 25/76 (33%)
CA 851..925 CDD:214520 25/75 (33%)
CA 1026..1085 CDD:214520 26/79 (33%)
Cadherin_repeat 1177..1280 CDD:206637 29/121 (24%)
Cadherin_repeat 1289..1385 CDD:206637 33/208 (16%)
Cadherin_repeat 1414..1510 CDD:206637 33/103 (32%)
CA 1576..1658 CDD:214520 16/81 (20%)
Cadherin_repeat 1666..1760 CDD:206637 28/96 (29%)
Fat3XP_038936706.1 Cadherin_repeat 47..152 CDD:206637
Cadherin_repeat 161..261 CDD:206637
CA 285..363 CDD:214520
Cadherin_repeat 379..467 CDD:206637
Cadherin_repeat 476..573 CDD:206637
Cadherin_repeat 591..671 CDD:206637
Cadherin_repeat 732..826 CDD:206637
Cadherin_repeat 834..930 CDD:206637
Cadherin_repeat 939..1022 CDD:206637
Cadherin_repeat 1048..1143 CDD:206637 27/120 (23%)
Cadherin_repeat 1151..1249 CDD:206637 23/109 (21%)
Cadherin_repeat 1257..1347 CDD:206637 22/101 (22%)
Cadherin_repeat 1366..1478 CDD:206637 14/111 (13%)
Cadherin_repeat 1486..1584 CDD:206637 30/110 (27%)
Cadherin_repeat 1593..1683 CDD:206637 27/94 (29%)
Cadherin_repeat 1698..1787 CDD:206637 26/97 (27%)
Cadherin_repeat 1795..1901 CDD:206637 14/105 (13%)
Cadherin_repeat 1920..1999 CDD:206637 16/84 (19%)
Cadherin_repeat 2009..2102 CDD:206637 27/96 (28%)
Cadherin_repeat 2110..2201 CDD:206637 23/93 (25%)
Cadherin_repeat 2213..2305 CDD:206637 27/96 (28%)
Cadherin_repeat 2313..2412 CDD:206637 14/98 (14%)
Cadherin_repeat 2420..2512 CDD:206637 9/91 (10%)
Cadherin_repeat 2522..2618 CDD:206637 28/117 (24%)
Cadherin_repeat 2626..2721 CDD:206637 11/94 (12%)
Cadherin_repeat 2734..2832 CDD:206637 20/101 (20%)
Cadherin_repeat 2840..2942 CDD:206637 34/138 (25%)
Cadherin_repeat 2950..3047 CDD:206637 26/134 (19%)
Cadherin_repeat 3056..3149 CDD:206637 29/96 (30%)
Cadherin_repeat 3157..3254 CDD:206637 20/122 (16%)
Cadherin_repeat 3263..3359 CDD:206637
Cadherin_repeat 3367..3464 CDD:206637
Cadherin_repeat 3473..3564 CDD:206637
Cadherin_repeat 3583..3660 CDD:206637
Laminin_G_2 3887..4016 CDD:396680
EGF_CA 4045..4080 CDD:238011
EGF_CA 4079..4118 CDD:238011
EGF_CA 4120..4155 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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