DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and cdh-12

DIOPT Version :10

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:NP_001360600.1 Gene:cdh-12 / 190583 WormBaseID:WBGene00022103 Length:2893 Species:Caenorhabditis elegans


Alignment Length:2472 Identity:484/2472 - (19%)
Similarity:863/2472 - (34%) Gaps:828/2472 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KKKASQDMAVICVWVMPLAVFGLIAIGQAA-------KTGQVQASSGSCAFHTLDGVAAESEGVR 74
            ||::||:                  :|.|:       |..:.:|.|.:.....:||...|..|||
 Worm   617 KKQSSQE------------------VGGASRSEDKKTKEPEDEAESDTVTEKKVDGAGQEVGGVR 663

  Fly    75 ----------FIRLREDAQVGKEILRLQAYPRSTAA----LKGADASGDHKYFNLTEHNATTLVV 125
                      ....:|:.:..:||......|:|.|:    :.||:::..:|..:.:..|  .|.:
 Worm   664 PEVGGDNQEMGGASKENIEETEEIEEETEEPKSEASSQDKVGGANSNFQNKSTDKSLEN--QLNI 726

  Fly   126 SLARSLERL----------VDRDVPRNLLKFRILCAGKQEKLEEGSYLSITVYIEDVNDNAPEFL 180
            |.:.:.:.:          |.::..:.:||...  .|:.|.||.         :||..|  .|.:
 Worm   727 SESETSKEMGGATIQKVGGVKQENVKTILKAPE--TGESENLEN---------LEDSED--VEVV 778

  Fly   181 NVPYVVDVDENTSIESIIFEGVQ------------AFDRDKPNTPNSEVHFSMSTVPEQLSADGS 233
            .|...|:|:|:..:.....|.|:            ..|..:..|...|.    :||.|:..|..:
 Worm   779 TVIEEVEVEEDDDVIEDHVENVENDVRTTTASMSRTVDHQRTTTEEPEA----NTVEEEPPAPTT 839

  Fly   234 PYFALKSPHRPLLILKRELDFDNGIRQF----KLPIFAWDR------------------------ 270
            ..|:...|.........|:..::.|.:.    :...:|.||                        
 Worm   840 TVFSFPQPEYTYDAFGMEIQENDVIGKVAAGPRTEFYAVDREMIGLIKINEAGELLAGKKLNRHK 904

  Fly   271 ------------GTPANQANTTITINV-RDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFA 322
                        |....:|..|:..:. |||....|:|....||..|||..             .
 Worm   905 DGPLKFGVSATNGFETARAQVTVLRDANRDVMSAMPRFDRETYRFSINENQ-------------Q 956

  Fly   323 PPIMAFDQ-------DSLNASLVYDIISGN--ERQLFRVNPHNGVMYLQKEIDLEEESLPGNTFV 378
            |.::.|.:       .|.:..|.|.:|:..  :...|.::..:|.:...:.:|.|::..      
 Worm   957 PEVIGFVRAFHSAISSSESVRLTYSLIAPAHIDELPFEIHEQSGEVSTSRPLDTEQKKF------ 1015

  Fly   379 LQLEARQKDNPLKKALARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGEN 443
            .:.:.|........:.:.:.|||:|:|||.|.|.......::..::|.|..::::.|.|.|.|.|
 Worm  1016 YRFQVRACLTQTICSTSDVIVEVVDVNDNPPIFTNRKLEATVESDVPPGTRIVKLFAKDADAGNN 1080

  Fly   444 SEFLYNLVETKDAAGAFRIDSRTGWITVRDDRLLDREQRRSIQLNVEALERNPSYLDDKHLKKPG 508
            |...:.|:...:   .|.||..:|.:|..                 ::|.| |.|.....:...|
 Worm  1081 SRLSFALMSENE---PFSIDPNSGQLTTS-----------------QSLTR-PLYTILVSVSDAG 1124

  Fly   509 -PSK---VQVEITLLDTNDNTPKFEHGNLYEFKVPINAP--TGYVIGQVVAHDPDEGPNGHLLYE 567
             |.:   .:|.:.:..||.:.|.|:.   .|:|..|.||  .|.|||:|.|.|||.|..|.:.|:
 Worm  1125 VPQRSDTAEVTVVVKGTNPSPPAFDQ---KEYKAVIAAPIRAGQVIGEVRATDPDPGMEGLVTYK 1186

  Fly   568 LQRPKGSGYIPFRLDNKNGTIYVGGP--LRRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATI 630
            |.|...:.:..|.:::|.|.|....|  |..|.|.:.:||||...|...:..:...|.|     |
 Worm  1187 LLRSDNNDHQKFMINSKTGVISAISPLSLEDGPIELGIEATDNGKNLKRKVKTNMKIDI-----I 1246

  Fly   631 DDQAIDFVGAPYEFWVGANTPLGTSVGQV-----------------RTTLIYEG----------- 667
            |.:.:.|:..|...::.....:|:.:.:|                 .:..:.:|           
 Worm  1247 DSKTLKFLPLPTTVYISTEKAVGSVILRVSAVSTDNENIKFRALQENSQFVMDGDLLRVANHLVE 1311

  Fly   668 GDEIM---------------------------------YD------------------------L 675
            |:.|:                                 ||                        |
 Worm  1312 GESILSIRAETDTVHVDHQLKVIVMSDRDKYPVFPQLTYDFDVSTDGHFPRIVHQFNAKLGAGTL 1376

  Fly   676 LHTYSEGVP----FAIEERSGIITVIRELSEFKRK-----VYQFEAVANYLFANSSQSLVMSRSS 731
            .:|:....|    |.:::::|.:.|..:..|.||:     |......||..:::...::....::
 Worm  1377 RYTFFPPSPAPAGFYLDDKTGELFVTSQYPETKRETVFVVVRAVNMQANKFYSDVGVAITPVSTT 1441

  Fly   732 SP---------------------------LTTIASPAELS---DEGVL--ITNLTIHIVNK---- 760
            :|                           :|...|||:||   |...|  ..|.|:.:..|    
 Worm  1442 NPTLRFQQPNYNFEVYESLGEGEAIGTISVTGSTSPAKLSLSPDTSFLGIHQNGTLFLAQKVDAE 1506

  Fly   761 --------------------PEQ-----KVPLRPVIE---EINMNVIHFHVEENVV--GGIIG-- 793
                                ||.     .|.:|.|.|   |.:.:.:.|.:|..|.  |..||  
 Worm  1507 EIESLSQEFTVLAESSGKENPETARALIHVAIRDVNEFQPEFDEDDVEFSLERGVATPGATIGRV 1571

  Fly   794 -----------QLLYK--------------NGINLVNNEL------------------GTYRE-- 813
                       :|:|:              :|..:|.:|.                  |.:..  
 Worm  1572 QAHDQDVSEKNRLIYRVVGGSGRKLVFIQEDGTIIVGDEQIPAAVDEFDLIIEAVDRNGNHDSTH 1636

  Fly   814 -------------------MPSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYI 859
                               .|:||...|:|.|:....:.::.|..    :..|:||..:..|   
 Worm  1637 VIVYIDGAPTSSTEEHEPLFPAEPLVWNVTEGTTQSFQLQTASDD----VIYRIVGGNDDGL--- 1694

  Fly   860 IANQQEVVNKISITEDGTLLTLTGLDREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVDDVNDNA 924
                      ..::..|.|..::.|||.:|.||.|.|..:.| |:...|.: .|||.....|.:|
 Worm  1695 ----------FELSSRGELKIVSELDRTRQKSYTLQVEAKKS-GVAKVAEV-TVNINPTISNAHA 1747

  Fly   925 PKFNALTYVGLINENCVVGTELSMNHAILIQDADEGP--------------------NAEFRVQL 969
            |||....|.|.:..:..:|..:....|.   |.|:.|                    ...::|.:
 Worm  1748 PKFTRDHYSGTVPLDAPIGFPIVTMEAF---DEDDDPVQYTFKGTGCADQLGIDNSGRVAYKVAM 1809

  Fly   970 Q---------------GDYSDEFSIEYVNGTSSENSTHHKMPSTTGAFNIFNLTDQWNDEFKYQE 1019
            :               |::|.|..:..:...:.|..|..|.|:....|::...|      |...:
 Worm  1810 KDRTTGSLECTVVVSDGEHSAETMLTLLVQENEEVETPQKPPNHAPTFSMAEYT------FTIPQ 1868

  Fly  1020 LHT---TFMQT-------NFKLSSGPY---FRISYTGK---RGLDREKQQLYNLKIIAADTGG-- 1066
            ..|   |.|.|       :|.:....|   |.:..:|:   ||  ..:||.|:..::|.|.|.  
 Worm  1869 NSTDLGTVMATDPDGDLIDFSIEPTEYRNLFHVDSSGRIFVRG--PLEQQRYSFLVVAEDRGSPI 1931

  Fly  1067 LSGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVESSSGMTAPQATAAMMLAP 1131
            ||.:.::.||                                   ||::.....|:|::      
 Worm  1932 LSSFVNVKVL-----------------------------------VEATQEQLDPEASS------ 1955

  Fly  1132 PPYHIPGSP---RFNVDRERSVGAGLGVV--------------------ARAKSRRRMVRALT-- 1171
             |.|...|.   .:.|:....||:.:|.|                    ..:..|..:|:.||  
 Worm  1956 -PQHFQFSQAVYSWRVESGLPVGSIVGFVKPVGVTDGISYSFISGDYLAIDSDGRVAVVKPLTET 2019

  Fly  1172 --------------TKCPLFAIYEDTPVGTKVL------QLSASDEDFGKNALLHYELQGEQVER 1216
                          .:..:|...|.:...|::|      |:.:::..    |......:.....|
 Worm  2020 VNDVVIAMKNGEILAETRIFVGVEPSEATTRILGPVTTTQVPSTEAP----ATSTQSSEESPSSR 2080

  Fly  1217 TPGMPML---------RVHGVKYFAIDKLSGELSVNYPLSANIEIMLNLTVTDIDGLKDSTCLRF 1272
            |..:|.|         |...:.....:.:|...:...|..|.|:    |....:.|         
 Worm  2081 TSELPTLPPATPRITSRPSQLTLAPTEDISMVSTEQGPTLAPID----LPTRAVTG--------- 2132

  Fly  1273 TVMDVNNHAPTFKKSWYSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTLSDSHLPFTIKPASG 1337
            .|:.:::...||....||..:.||::|..:..::.......|.:...::::.|:.|||.:.|...
 Worm  2133 RVIPLDSGRFTFTSPIYSAFSLEGDFKSGIELEIKPTLAVQGSSEPPSFSIEDTTLPFFLTPEGK 2197

  Fly  1338 VLKIGGQLDRELKDKYSFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFI 1402
            ::..  :.|||..:.|.|.::|.     .|...:...:.|.:||:|||.|.|..:.|   ||.. 
 Worm  2198 LIMF--EADRERHESYLFTIVAK-----AQGQMARARLNVTILDVNDNYPRFQAHPD---AVGI- 2251

  Fly  1403 PSVADRTLML--PVYKAYLDRSTQPGTFVRQLTAIDKDNVGNGNGLVLYSIRHQEMQAPLFQIDS 1465
                .||:.|  |:|               ||.|:|.|...:..  |.||     :.:|...|||
 Worm  2252 ----SRTMHLGSPIY---------------QLKAVDLDKFPDNQ--VTYS-----LNSPWISIDS 2290

  Fly  1466 RDGTISTISRINGYNDY----EHLNVSVIASDVGSPALSATAIVIVNLQGQAVTDPPK--STP-- 1522
            |:|.:    |:||  |.    |.|:::|.|.|.|.|.|.:...:.:.:..|.:   ||  .||  
 Worm  2291 REGLL----RVNG--DLQAAPESLDLTVEAQDSGKPPLKSETHLRILIFKQNI---PKFLETPLE 2346

  Fly  1523 ------KPEPPANV-------TVFQ------------HAYYEVKLTE---------NNEAPIEVM 1553
                  |..|.|::       ||.:            :..:|:|...         :|||..| .
 Worm  2347 VTQIPTKMAPGAHIKTLLAGPTVSEQDTILYRLVDTVNGLFEIKHAGELVLARRPLDNEAGRE-Y 2410

  Fly  1554 RLNLSAGLNPENYRWSLWL-----EEG-----------------------LDETDAH-------- 1582
            :||::|    ||.:.:.|:     .||                       ::.:.||        
 Worm  2411 QLNVTA----ENSKGTDWVVLPIFVEGRLSSTNTPSTSCQFQQKVYRAQVMENSGAHDAVVRVQA 2471

  Fly  1583 --------------PPFEYDAKNMLLYALKPFDREHISRYQLRIRADRLSREARNYARVSYPVVD 1633
                          ..||.|:::..:|..:|.|||..|.|.|.:.....:|:.::         |
 Worm  2472 GCQKKFRYAFHTQSKEFEIDSQSGQIYTTEPLDRETKSTYFLTVNVIEQNRKRQS---------D 2527

  Fly  1634 ERIEGLSLN----ECRILVHIADENDNAPKFRG--NGQPIVAVLPQSASFGYPVTRVEANDLDEG 1692
            .::|.||..    :..::|.:.|:|||||.|..  ....:.||:.|:|:...|||.::|.|||. 
 Worm  2528 VQVEQLSSKLSPWQTLVVVTVLDDNDNAPVFLHMLPDSTLAAVVDQNANLMSPVTHLQARDLDV- 2591

  Fly  1693 LNAEIRYRLLNEPARLFGIDELSGNIRLLGELSRT--EHIYGFDVKATDRMGADDGRSGI-VNVF 1754
            |...:::.|....|..|.::..:|.::|...|.::  ||   |:::||    ..||:..: |.:.
 Worm  2592 LPGNLKFELEGPEADSFFLNSTNGLVQLAKSLEKSDVEH---FELQAT----VTDGKHAVHVPLN 2649

  Fly  1755 VYIINEAKQVRLVVAGM------PVEVERRIEGLMEALSDAIGKDVRVRLLEPY---SGGLE-PA 1809
            :|:::....|..:....      |..|||:       |::.:|.|.|:.:.:|:   .|..: ..
 Worm  2650 IYVLSVDTNVVQLTKNTPHSDIDPSAVERK-------LTEILGMDTRILVAQPFVSDDGKTDMKK 2707

  Fly  1810 TNAYIYAVDPHTNSIMEMEQLQDALAGLQLDALQLQQQKLDGGKPMPRILELAEFGQLARPAHAS 1874
            ::.::|::|..:...:..::|:           :|.....||..|:          |::..:..|
 Worm  2708 SHVFVYSLDNLSQKPISRDELK-----------RLLMAHSDGLHPL----------QISSVSLLS 2751

  Fly  1875 ASSFMGGLEFVTVVLLALISLGALIAACCYVCMRQKRRLWSQRDFSASDAGL---TYTIAGIGS- 1935
            ..:..|..:|:..|:|.::.:..|:..|..:....|||       :.:.||:   .|.|..:|| 
 Worm  2752 TGNAAGNGQFLLTVVLLVVLIALLLFICALIMCCAKRR-------ARNTAGVMEGAYMINSVGSG 2809

  Fly  1936 PR 1937
            ||
 Worm  2810 PR 2811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 25/159 (16%)
Cadherin_repeat 325..407 CDD:206637 15/90 (17%)
Cadherin_repeat 416..524 CDD:206637 23/111 (21%)
Cadherin_repeat 534..626 CDD:206637 34/95 (36%)
Cadherin_repeat 641..>714 CDD:206637 18/166 (11%)
CA 851..925 CDD:214520 18/73 (25%)
CA 1026..1085 CDD:214520 17/73 (23%)
Cadherin_repeat 1177..1280 CDD:206637 18/117 (15%)
Cadherin_repeat 1289..1385 CDD:206637 22/95 (23%)
Cadherin_repeat 1414..1510 CDD:206637 27/99 (27%)
CA 1576..1658 CDD:214520 23/107 (21%)
Cadherin_repeat 1666..1760 CDD:206637 27/96 (28%)
cdh-12NP_001360600.1 Cadherin_repeat 385..479 CDD:206637
Cadherin_repeat 487..576 CDD:206637
Cadherin_repeat 946..1044 CDD:206637 21/116 (18%)
Cadherin_repeat 1054..1142 CDD:206637 21/108 (19%)
Cadherin_repeat 1152..1247 CDD:206637 34/99 (34%)
Cadherin_repeat 1562..1641 CDD:206637 9/78 (12%)
Cadherin_repeat 1677..1739 CDD:206637 20/80 (25%)
myxo_dep_M36 <1723..1985 CDD:468355 61/316 (19%)
Cadherin_repeat 1861..1943 CDD:206637 22/124 (18%)
Cadherin_repeat <2174..2238 CDD:206637 17/70 (24%)
Cadherin_repeat 2251..2332 CDD:206637 31/113 (27%)
Cadherin_repeat 2347..>2419 CDD:206637 15/76 (20%)
Cadherin_repeat 2451..2554 CDD:206637 21/111 (19%)
Blue background indicates that the domain is not in the aligned region.

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