DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and cdh-7

DIOPT Version :9

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:NP_497075.2 Gene:cdh-7 / 175143 WormBaseID:WBGene00000399 Length:1364 Species:Caenorhabditis elegans


Alignment Length:1544 Identity:301/1544 - (19%)
Similarity:529/1544 - (34%) Gaps:497/1544 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 GSYLSITVYIEDVNDNA--------PEFLNVPYVVDVDENTSIESIIFEGVQAFDRDKPNTPNSE 216
            |..|||......:..||        |||:...  .|:||..::|   .||               
 Worm    18 GDLLSIPSTTFKIPRNAQEGDLIIGPEFIRAS--EDIDEALNLE---LEG--------------- 62

  Fly   217 VHFSMSTVPEQLSADGSPYFALKSPHRPLLILKRELDFDNGIRQFKLPIFAWDRGTPANQANTTI 281
                  |.|..::.:||...| ..|.:.:|:.|..  ||:|..:.||.......|....:   ||
 Worm    63 ------TNPSPIAINGSIIDA-GQPVKFILVNKNA--FDSGKSKVKLQAIGVISGKVQEE---TI 115

  Fly   282 TINVRDVDDLP--PKFTEGVYRTRINEFYPMTGVPIRI--PLYFAPPIMAFDQDSLNASLVYDII 342
            ...|....|||  |:.:..|.:   ::|.......:|:  |:   ||         |:.|  ||:
 Worm   116 NFEVEASSDLPSIPEISNFVVK---SDFQEKETAIVRVSSPI---PP---------NSEL--DIL 163

  Fly   343 SGNERQLFRVNPHNGVMYLQK-EIDLEEESLPGNT--------------FVLQLEARQKDNPLKK 392
            ..               |.|: ....|::.:..||              ||:.|..|..:|.::.
 Worm   164 GS---------------YAQRVTATFEDDKIILNTVPCHADTPCEVTFPFVVILVLRNGENHVEA 213

  Fly   393 ALARIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVETKDAA 457
            .|...|.:...|     :.....|..:|.|:......:::::.    :|.:||.||:|   :||:
 Worm   214 LLTFQEEKKSSL-----KMAQKLYQTTIEEHTGEQDHLVKIST----KGGSSEVLYSL---RDAS 266

  Fly   458 GAFRIDSRTGWITVRDDRLL----------------DREQRRSIQLNVE---ALERNPSYLDDKH 503
            |.|.|..:.|.:::.....|                |.::.....:||:   .:|:|..:     
 Worm   267 GLFSIHPKEGILSILHPEFLSISSFGDTVNLTVVATDGDKTADAMINVKIVPEVEKNVVF----- 326

  Fly   504 LKKPGPSKVQVEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVI--GQVVAHDPDEGPNGHLLY 566
                |..|...:||..:.|...     ||:   |....:|..|.|  |::..:..:  |||.|:|
 Worm   327 ----GFEKESYDITAENINSIL-----GNI---KAKSASPVVYRITEGRIDLYKVE--PNGDLVY 377

  Fly   567 ELQRPKGSGYIPFRLDNKNGTIYVGGPLRRGRIAVFVEATDQPTNPSERRFSLAVITIEVYATID 631
            ..:..||.     |.|:....:..|| |:.....|.:......:||......|..|.:       
 Worm   378 TGKMVKGD-----REDDVTVVVQQGG-LKMASTKVHINLKGIGSNPVSTSDELEKIEL------- 429

  Fly   632 DQAIDFVGAPYEFWVGANTPLGTSVGQVRTTLIYEGGDEIMYDLLHTYSEGVPFAIEERSGIITV 696
                          :.:..|.|..|    |.:.::..|:   |...||...:...::|...:|.:
 Worm   430 --------------ISSEDPNGVVV----TLIQFQDEDK---DAKLTYELTMENGVDENGNMIPL 473

  Fly   697 IRELSEFKRKVYQFEAVANYLFANSSQSLVMSRS--SSPLTTI---------ASPAELSDEGVLI 750
            ..:|.|.|.:    |.||:         ||:|.:  :|.:|||         ..|.|.|   |.:
 Worm   474 QEQLFEIKSE----EKVAH---------LVVSGNLKTSKITTILLKITARDSTHPKEPS---VTV 522

  Fly   751 TNLTIHIVNKPEQKVPLRPVIEEINMNVIHFHVEENV-VGGIIGQLLYKNGINLVNNELGTYREM 814
            |.|.:....|.|:        |.:.:|:|....|..| |...:|..:||                
 Worm   523 TRLIVIQREKSEE--------EPMGLNLIPLPTEILVPVDSAVGSFIYK---------------- 563

  Fly   815 PSEPTSRNITMGSRFRSRNRSRSSKSKRRLPRRLVGDANIKLRYIIANQQEVVNKISITEDGTLL 879
                    :|:                  ||.:      ..|:|.|    |..:...|.:||:::
 Worm   564 --------VTV------------------LPMK------ENLQYSI----EPEHLFQILDDGSIV 592

  Fly   880 TLTGLDREQQPSYELTVIVEYSTGLVSGAGIYQVNIKVD----------DVN--DNAPKFNALTY 932
            |...|..|.:   :|.:.||.|.|....:....:.:|..          ||.  ...||.:.:|.
 Worm   593 TQKELTVEAE---QLKIHVEVSDGSEKKSTETTLTLKKTLHPHFTESRYDVTLPRQTPKDSVITV 654

  Fly   933 VGLINENCVVGTELSMNHAILIQDADEGPNAEFRVQLQGDYSDEFSIEYVNGTSSENSTHHKMPS 997
            |..:..|                    |......|..:|.:|..|.|:                 
 Worm   655 VSAVGGN--------------------GEPVNQFVLKKGGHSKHFKID----------------- 682

  Fly   998 TTGAFNIFNLTDQWNDEFKYQELHTTFMQTNFKLSSGPYFRISYTGKRGLDREKQQLYNLKIIAA 1062
            ..||..:.:..::::|                                 ||.|    .:|.:..|
 Worm   683 EKGALRLADEQERFDD---------------------------------LDDE----MDLLVALA 710

  Fly  1063 DTGGLSGYAHLTV--------------LVADVNDNAPMFERISVFKDSRLEI--REYTTD----M 1107
            :...:|...|:::              :.|.|.||.|:...:...:.:..|:  .|.|:|    .
 Worm   711 ENPTISVPVHISLKKNRNPRIDLVENQIFATVYDNLPINSYVGKVEVASKELVKFEMTSDEKGMS 775

  Fly  1108 EIYFVESSSGMTAPQATAAMMLAPPPYHIPGSPRF-----NVDRE--RSVGAGLGVVARAKSRRR 1165
            .::.:|....:.:....|..         .|..:|     |:|:.  ||..|.: |:...||...
 Worm   776 SLFGIEEDGTIRSKDWLAGS---------EGMHKFSVLASNIDQAGVRSANATV-VIDVIKSNEC 830

  Fly  1166 MVRALTTKCPLFAIYEDTPVGTKVLQLSASDEDFGKNALLHYELQGEQVERTPGMPMLRVHGVKY 1230
            ..:....:..:|.:.|:||:.|.:.::|| |...||.| |.|.:.|...|              .
 Worm   831 SPKFKRDENLIFYVRENTPIDTVIGKVSA-DVLPGKCA-LEYSIIGPNSE--------------I 879

  Fly  1231 FAIDKLSGELSVNYPLSANIEIMLNLTVTDIDGLKDS--TCLRFTVMDVNNHAPTFKKSWYSFDT 1293
            .:|:..:|||..:.......:....||:..:.|..:|  :.....::||::|...|:....:.:.
 Worm   880 LSINSANGELKTSKEFDFEKQKSYLLTLKLVAGKYNSVESGAELKILDVDDHEVKFELQEQTVEI 944

  Fly  1294 PEGEYKDSVLGQLTAIDMDFGENANITYTLSDSHLP-FTIKPASGVLKIGGQLDRELKDKYSFQV 1357
            ||....::|:..:.|.:.|  |:..:.|.|.....| |::...:|.:.:...||||..|.:..::
 Worm   945 PEDAPLNTVVATVKATEGD--ESQEVFYHLKAGSPPQFSLNSKTGEVMVEQALDREALDNFEIEI 1007

  Fly  1358 IATDNAPVMQRMSSSVDVEVNVLDINDNRPEFIGYDDQTKAVKFIPSVADRTLMLPVYKAYLDRS 1422
            .|:::..::.  ::::.:.|.|.|:|||.|.|                 ||    |.|...:.:.
 Worm  1008 GASNSVDLIG--TAAMKLLVKVKDVNDNGPTF-----------------DR----PQYFTVVSKD 1049

  Fly  1423 TQPGTFVRQLTAIDKD------------------------NV-------GNGNGLVLYSIRHQEM 1456
            |..|..:.:|.|.|.|                        ||       |..|..:..|....:.
 Worm  1050 TVVGAELLELNAYDPDLSDQEKKLEYTVTASSFEYRGMSRNVEDVLDIRGGENPKIYLSKPLTDY 1114

  Fly  1457 QAPLFQI-----DSRDGTISTISRINGYNDYEHLNVSVIASDVG-SPALSATAIV---IVNLQGQ 1512
            ...:|.:     |:.||||..    :....|.|.:..:::.::. ||:..:..::   ..||...
 Worm  1115 VGGVFNVQLQVRDTVDGTIGK----SALRVYVHDSSDLLSLELPYSPSTVSQGVIQEFTENLSNS 1175

  Fly  1513 -AVTDPPKSTPKPEPPANVTVFQHAYYEVK--LTENNEAPIEVMRLNLS 1558
             .:|..|||               .||:..  :...|...::|:..|.|
 Worm  1176 TGLTAIPKS---------------VYYKAPHGIMSTNSIDLQVIFFNKS 1209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 23/106 (22%)
Cadherin_repeat 325..407 CDD:206637 17/96 (18%)
Cadherin_repeat 416..524 CDD:206637 26/126 (21%)
Cadherin_repeat 534..626 CDD:206637 22/93 (24%)
Cadherin_repeat 641..>714 CDD:206637 14/72 (19%)
CA 851..925 CDD:214520 18/85 (21%)
CA 1026..1085 CDD:214520 11/72 (15%)
Cadherin_repeat 1177..1280 CDD:206637 25/104 (24%)
Cadherin_repeat 1289..1385 CDD:206637 21/96 (22%)
Cadherin_repeat 1414..1510 CDD:206637 23/135 (17%)
CA 1576..1658 CDD:214520
Cadherin_repeat 1666..1760 CDD:206637
cdh-7NP_497075.2 Cadherin_repeat 232..319 CDD:206637 19/93 (20%)
Cadherin_repeat 548..>613 CDD:206637 23/119 (19%)
Cadherin_repeat 842..931 CDD:206637 25/104 (24%)
Cadherin_repeat 939..1033 CDD:206637 21/97 (22%)
Cadherin_repeat 1041..1147 CDD:206637 20/109 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24026
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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