DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad89D and cdh19

DIOPT Version :10

Sequence 1:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster
Sequence 2:XP_031760338.1 Gene:cdh19 / 100493723 XenbaseID:XB-GENE-6045915 Length:780 Species:Xenopus tropicalis


Alignment Length:531 Identity:143/531 - (26%)
Similarity:224/531 - (42%) Gaps:117/531 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GDHKYFNLTEHNATTLVVSLARSLERLVDRDVPRNLLKFRILCAGKQEKLEEGSYL-------SI 165
            |..||..|.:.         |:::..:.:|.....|||       |.::.|:.||.       ::
 Frog    77 GSFKYILLGDG---------AKTIFTIDERTGKIYLLK-------KLDREEKSSYTLRAQAINTV 125

  Fly   166 T-----------VYIEDVNDNAPEFLNVPYVVDVDENTSIESIIFEGVQAFDRDKPNTPNS-EVH 218
            |           |.::|:|||.|:|:|.||...|.| .|.|......|.|.|.|.||..|| .:.
 Frog   126 TGVPVEAESEFIVKVQDINDNEPKFINEPYFATVPE-MSPEGTFVTQVTATDMDDPNYGNSARLV 189

  Fly   219 FSMSTVPEQLSADGSPYFALKSPHRPLLILKRELDFDNGIRQFK----LPIFAWDRGTPAN--QA 277
            :|:        ..|.|:|::: |...::.:..::|     |:.|    :.|.|.|......  ..
 Frog   190 YSI--------LQGQPHFSIE-PKSGIIRVVSQMD-----REAKDLYFVVIQAKDMAGSVGGLST 240

  Fly   278 NTTITINVRDVDDLPPKFTEGVYRTRINEFYPMTGVPIRIPLYFAPPIMAFDQD-SLNASLVYDI 341
            .||:|:::.||:|..|||.:.:|...|.| ..:.|..:.:       :||.|:| ..||.:.|.|
 Frog   241 TTTVTVSLSDVNDNAPKFQQKIYDMSILE-TSLVGEIVGM-------VMADDRDIGKNAEMTYKI 297

  Fly   342 ISGNERQLFRVNPHN----GVMYLQKEIDLEEESLPGNTFVLQLEARQK---DNPLKKAL----A 395
            ....:..:|.:...|    |::.|:|.:|.|.:    ..:.::::|..|   :..||..|    .
 Frog   298 EEKGDFSIFDIITDNLTQEGIIILRKTLDYESK----KRYSIRVKAINKHIDERFLKHGLFEDTT 358

  Fly   396 RIEVEVLDLNDNVPEFEADYYNISIVENLPTGFSVLQVNAVDRDQGENSEFLYNLVETKDAAGAF 460
            .:::.|.|: |....|....|.:.|:||.|||..|..|.|.|.| ..|:...|.|.::|. .|.|
 Frog   359 TVKIHVEDI-DEPAVFGLKEYFMEILENAPTGSYVGSVTAKDPD-NINTPVRYGLHQSKH-VGLF 420

  Fly   461 RIDSRTGWITVRDDRLLDREQRRSIQLNVEALERNPSYLDDKHLKKPGPSKVQVEITLLDTNDNT 525
            .||...|.||.  .:.||||:.....:.|.|.|...|    .|:     |:|.|.|.::|.|||.
 Frog   421 YIDLHLGAITT--TKPLDREEALWYNVTVTATEATNS----AHV-----SEVPVYIRIIDVNDNA 474

  Fly   526 PKFEHGNLYEFKVPINAPTGYVIGQ---------VVAHDPDEGPNGHLLYELQRPKGSGYIPFRL 581
            |:...    |:::       ||..|         :.|.|.||...|........|:.|....|.:
 Frog   475 PQLSE----EYRI-------YVCEQSKPREPIQIISAVDRDEATAGQQFSFTLLPEASNNTNFTV 528

  Fly   582 -DNKN--GTIY 589
             |||:  .|||
 Frog   529 RDNKDNTATIY 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 30/113 (27%)
Cadherin_repeat 325..407 CDD:206637 22/93 (24%)
Cadherin_repeat 416..524 CDD:206637 38/107 (36%)
Cadherin_repeat 534..626 CDD:206637 18/68 (26%)
Cadherin_repeat 641..>714 CDD:206637
CA 851..925 CDD:214520
CA 1026..1085 CDD:214520
Cadherin_repeat 1177..1280 CDD:206637
Cadherin_repeat 1289..1385 CDD:206637
Cadherin_repeat 1414..1510 CDD:206637
CA 1576..1658 CDD:214520
Cadherin_repeat 1666..1760 CDD:206637
cdh19XP_031760338.1 Cadherin_repeat 51..146 CDD:206637 17/84 (20%)
Cadherin_repeat 154..>233 CDD:206637 25/93 (27%)
Cadherin_repeat 262..369 CDD:206637 26/119 (22%)
Cadherin_repeat 377..473 CDD:206637 38/108 (35%)
CA 499..580 CDD:214520 14/41 (34%)
CADH_Y-type_LIR 713..>760 CDD:460041
Blue background indicates that the domain is not in the aligned region.

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